Anaeromyxobacter paludicola: AMPC_36230
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Entry
AMPC_36230 CDS
T08525
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
apau
Anaeromyxobacter paludicola
Pathway
apau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AMPC_36230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apau03400
]
AMPC_36230
Enzymes [BR:
apau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AMPC_36230
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AMPC_36230
DNA repair and recombination proteins [BR:
apau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AMPC_36230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
zf-TFIIB
Zn_Tnp_IS91
Zn-ribbon_8
Auto_anti-p27
DZR
TF_Zn_Ribbon
Zn_ribbon_SprT
RNHCP
Motif
Other DBs
NCBI-ProteinID:
BDG10510
LinkDB
All DBs
Position
4150391..4151359
Genome browser
AA seq
322 aa
AA seq
DB search
MPELPDVEVYREAIEARVRGAPLQKVRLASPFLLRTVEPPLGAAEGREVRAVRRLGKRLV
LALEGDLFLALHLMIAGRLHWKEAGAKLGGKAALAAFDFPHGALTLTEAGSKRRAALHLV
RGEAALRALDRGGVEPLEVDLAGFAAALRRERHTLKRALTDPGILAGIGNAYSDEILHRA
RLSPTQLAQNLSEEELARLHAATRAVLTGWTERLRREAGGDFPEGVTAFREGMAVHGRHR
QPCPDCGAPVQRIVRAENEVNYCPRCQTGGRILSDRSLARLLAEDWPKTLEELEKNPGLG
LRPPAAPARRGAVTARSSTRAR
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgcccgagctccccgacgtcgaggtctaccgcgaggcgatcgaggcgcgggtccggggc
gccccgctccagaaggtccggctcgcgagcccgttcctcctgcgcaccgtggagccgccg
ctcggggcggcggagggcagggaggtccgcgcggtccggcggctcggcaagcggctcgtg
ctcgcgctcgagggcgacctcttcctggcgctgcacctcatgatcgcggggcgcctgcac
tggaaggaggccggcgcgaagctcgggggcaaggcggcgctcgcggccttcgacttcccg
cacggcgcgctcaccctcaccgaggccggctccaagcggcgggcggcgctgcacctcgtc
cgcggcgaggcggcgctccgggccctcgaccgcggcggggtcgagccgctcgaggtggac
ctcgccgggttcgcggcggcgctgcggcgcgagcggcacacgctgaagcgcgcgctcacc
gacccggggatcctcgccggcatcggcaacgcctactcggacgagatcctgcaccgcgcg
cggctctcgccgacgcagctcgcgcagaacctctcggaggaggagctggcgcggctccac
gcggccacgcgcgcggtgctgaccgggtggacggagcggctccggcgcgaggcgggcggg
gacttcccggagggggtcacggccttccgcgaggggatggcggtccacggccggcaccgg
cagccctgcccggactgcggcgcgccggtgcagcggatcgtccgggcggagaacgaggtg
aactactgcccgcggtgccagaccggcgggaggatcctctcggaccgctcgctggcgcgg
ctcctggcggaggactggccgaagacgctcgaggagctcgagaagaacccgggcctgggg
ctgcggccgcccgcggcgccggcgcggcggggcgcggtcactgcccgtagtagtacgcga
gcacgatga
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integrated database retrieval system
