Candidatus Puniceispirillum marinum: SAR116_2323 Help Entry SAR116_2323       CDS       T01207                                  Name (GenBank) DNA ligase (NAD+)   KO K01972   DNA ligase (NAD+) [EC:6.5.1.2] Organism apb  Candidatus Puniceispirillum marinum Pathway apb03030   DNA replication apb03410   Base excision repair apb03420   Nucleotide excision repair apb03430   Mismatch repair Brite KEGG Orthology (KO) [BR:apb00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     SAR116_2323    03410 Base excision repair     SAR116_2323    03420 Nucleotide excision repair     SAR116_2323    03430 Mismatch repair     SAR116_2323  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:apb03032]     SAR116_2323    03400 DNA repair and recombination proteins [BR:apb03400]     SAR116_2323 Enzymes [BR:apb01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.2  DNA ligase (NAD+)      SAR116_2323 DNA replication proteins [BR:apb03032]  Prokaryotic type   DNA Replication Elongation Factors    Elongation factors (bacterial)     Other elongation factors      SAR116_2323 DNA repair and recombination proteins [BR:apb03400]  Prokaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     DNA ligase      SAR116_2323    NER (nucleotide excision repair)     GGR (global genome repair) factors      SAR116_2323    MMR (mismatch excision repair)     DNA ligase      SAR116_2323   DSBR (double strand breaks repair)    NHEJ (non-homologous end-joining)     SHDIR (short-homology-dependent illegitimate recombination)      RecET pathway       SAR116_2323 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_aden DNA_ligase_OB HHH_2 BRCT DNA_ligase_ZBD PTCB-BRCT Motif Other DBs NCBI-ProteinID:  ADE40567 UniProt:  D5BPR5 LinkDB All DBs Position complement(2541229..2543319) Genome browser AA seq 696 aa AA seqDB search MTRDHPDPSKMSADDAAQELAYLAERIAYHDRKYHGEDAPDISDADYDMLVARNNALEAS FPELIRPDSPSQRVGTMVSGSFGKIRHAQPMLSLSNGFSAEDIADFVTRIRKFLSLAETD DIAFTAEPKIDGLSLSLRYEKGHLVQAATRGDGSEGEDVTANIRTVDAIPKTLPDTVPDI FEVRGEVYMDRKDFLALNADQERKGGKIFANPRNAAAGSLRQKDVSITGSRNLAFFAYSM GEASAPVAATHTDFLAALRDFGFSVNDLSRHCLSLDDMLATYDAIGSQRASLDYDIDGVV YKVDRHDYQERLGQVARAPRWALAHKFPAEQAETTIIKIDIQVGRTGALTPVARLTPVTV GGVVVSNATLHNEDEIARKDIRIGDHVIIQRAGDVIPQVVRVLDEKRPDDVQIFTFPDRC PVCDSDAIRPEGEAVRRCTGGLACEAQLVEQLKHFVSRDAFDIEGLGARQIEQFLELGWV KTPADIFRLETRRDKLATLDGYGAKSLDNLFASINARRTIGLERFIYALGIRQVGQATSR LLALHYGDLDMMMSALDPENTESEHEIAIAALVDIDQIGDAMAADICRFFGDTAHRNIVN DLASELSILPPERPSEDSAVSGKTVVFTGTLARMSRAEAKAKAEALGAKVSGSVSAKTDY LIAGADAGSKARKAAELGVTVLSEDEWRALIGAPSS NT seq 2091 nt NT seq  +upstreamnt  +downstreamnt atgacacgcgatcatccagaccccagcaagatgtccgctgatgacgccgcacaagaactg gcatatctggccgagcgtattgcttatcatgatcgcaaatatcatggcgaagatgccccc gatatttccgatgccgattatgacatgctggtagcccgaaataatgcgcttgaagccagc tttcccgaactgatccgtcctgatagcccaagccaacgtgttggcaccatggtgtctggc agctttggcaagatacgccacgcacagccgatgttgtcactgtcgaatggctttagtgcc gaagatattgcagactttgtgacccgtattcgcaaatttctgtcattggcagaaaccgat gacattgcttttaccgccgaaccaaagatcgatggcttatcgttaagcctgcgttatgag aagggtcatctggttcaggccgcaacccgcggtgatggtagtgaaggcgaagatgtgacc gccaatatccgcaccgttgatgcaatccccaaaacattgcctgacacagtgccagatatt ttcgaggtgcgcggtgaagtctatatggaccgaaaagattttctggctctgaacgctgat caggaacgaaaaggcggcaagatttttgccaatccgcgtaacgccgctgccggatcgcta aggcaaaaggatgtcagcattacggggtcgcgtaatctggcatttttcgcctattcaatg ggcgaagccagcgcacctgtcgccgcaacgcatactgactttctggcggctttgcgagat ttcgggttttcggtgaatgatttatcgcggcattgcctctcgttagatgacatgctggca acctacgatgctatcggaagtcaacgcgcatcactggactatgatattgacggtgtcgtt tataaagttgatcggcatgattatcaggaacgccttggacaagtggcgcgggcaccgcgt tgggccttggcgcataaatttcccgccgagcaagccgaaacaacaattatcaaaattgac attcaggtcgggcgcaccggcgcattgactcccgtggcaagattaacacctgtcaccgtt ggcggcgttgtcgtatcaaatgcaactttgcataatgaggatgaaatagcccgtaaagat atccggattggcgatcatgtcattatccagcgcgctggtgatgttattccgcaagtggta cgcgtgcttgatgaaaagcgtcccgacgacgtccagatattcacctttccggatcgctgt ccagtttgtgactcggacgcgatccgccccgaaggcgaagccgtgcggcgctgcaccggt ggattggcgtgtgaagcacaacttgtcgagcaactcaagcatttcgtatcgcgcgatgcg tttgatatcgagggtctgggcgcacgccagatcgaacagtttctggagcttggctgggtc aaaacgcccgccgatatcttccgccttgaaacacgccgcgacaaactagccacgctagat ggatatggggcaaaatcgcttgataatctgtttgcctcaatcaatgcacggcgcacgatc ggacttgaacgctttatatatgcgttgggcatccggcaggtaggacaggccacctcacgg cttctggcgctacattacggtgatctggacatgatgatgtcggcacttgatccggaaaat actgaaagcgaacatgagatagccatcgccgcgcttgttgatattgaccagattggtgat gcaatggcagctgatatatgccgattttttggcgatacagcacaccggaatatcgtaaat gatttggcatccgaactgtcgatattaccaccggagcgaccatctgaagacagtgccgtc agtggtaaaaccgtcgtattcactgggactttggcacgcatgtcccgcgccgaagccaaa gccaaggccgaagcccttggtgctaaagtgtccgggtcggtatcggcaaagacagattat ctgattgctggggctgatgctggatcaaaagcgcgtaaggcggctgagcttggcgtcact gttcttagtgaagatgaatggcgggcacttattggcgccccatcatcataa

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