Candidatus Puniceispirillum marinum: SAR116_2325
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Entry
SAR116_2325 CDS
T01207
Name
(GenBank) ATPase involved in DNA repair
KO
K03631
DNA repair protein RecN (Recombination protein N)
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_2325
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAR116_2325
TLS (translesion DNA synthesis) factors
Other SOS response factors
SAR116_2325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_21
AAA_29
AAA_22
DUF1664
CCDC93_CC
AAA_15
DUF2813
RsgA_GTPase
ABC_tran
Nuf2_DHR10-like
EzrA
AAA_13
BRE1
SKA2
Motif
Other DBs
NCBI-ProteinID:
ADE40568
UniProt:
D5BPR6
LinkDB
All DBs
Position
complement(2543322..2544983)
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AA seq
553 aa
AA seq
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MLQSLSVTNIVLIEQLTLQFDDGLTVLTGETGAGKSILLDALGLALGSRANFGLIRQGST
QAQVSASFHMDAKHPVWALLEDAGVDIDDTLILRRRLKADGKSSASINDVPVSVGLLHKV
GDLLVEIQGQFEGRGLLDVSRHITLLDRAAGHQEMLDKLSDAHAHWMQSKRNLATAKLEL
DQARADEEWLRDAVHQLDALSPSSGEEAQLVSERDMLANVGKIGETLALADHALTDENGA
QASLGSAMATLEKSASLAGSALDNALAALSRADAELSEAISEISAVGSSLEADPNRLESV
DDRLHELRQQARKHNCNVDGLVETHQQLASRLAAIEDSSGTLAELADNERQWRDYYTKMA
KIVSDARKSAAALLDRAVMAELPPLKLENATFHSHISALPADQWGALGMDMVRFEASTNR
GMAQGPIDRIASGGELARFLLALKVALEDSNTSRTLIFDEVDSGVGGAVAAAVGDRLARL
GEHMQTLVITHSPQVAARGVNHMRIAKHVTDESVISGTETLSDDARTEEIARMLAGEHIT
AEARAAATALLEG
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcttcaaagcttgtccgtcactaatatcgtcctcattgaacaacttacgttgcaattt
gatgatggactgacggtgctgacaggcgaaaccggtgcgggtaaatcgatcttgcttgat
gcgctgggtctggccttaggaagccgggcgaattttggcttaatccgtcaaggcagtacg
caggcacaggtaagtgcaagctttcatatggacgccaaacatccagtatgggctttgctg
gaagatgccggcgttgatattgacgatacattaattttgcggcgacgcttgaaagccgat
ggaaaatcaagcgcttcaatcaatgatgtacctgtttcggttggcctgctacataaggtt
ggcgatctgcttgttgagattcaggggcaatttgaggggcgtggtctgcttgatgttagc
cgccatatcaccctgcttgatcgcgccgccggacatcaggagatgctggacaagctatca
gacgcccatgcgcattggatgcagtcaaagcgtaatctagccacggcgaaactagaactt
gatcaggcgcgcgccgacgaagaatggcttcgcgatgcggttcatcagcttgacgcccta
agcccttcatctggtgaagaagcacaattagttagtgaacgtgacatgcttgccaatgtt
ggcaagattggcgaaacgctggcgcttgctgaccatgccctgaccgatgaaaacggagcc
caggccagccttggcagtgccatggctacgcttgaaaaatcagcatcactagcaggtagt
gcgcttgataatgccctcgccgcattgagccgcgccgatgccgaattatccgaagccatc
agcgagatcagcgcggttggatcaagtctggaagctgacccaaaccggttggaatctgtt
gatgaccggcttcatgaattacgccagcaagcccgtaaacataactgtaatgttgatggg
ctggtagaaacgcatcagcaacttgccagccgtcttgccgcgattgaggattcgtctggt
acgttagcggaattggccgataatgaacggcaatggcgcgactattatacaaaaatggcc
aagatagtgtccgacgcccgtaaatcagctgcagcgttgctcgaccgtgcggtcatggcc
gaattaccacccttaaagctggagaacgcgacctttcactcacatatttccgcattacca
gcggatcaatggggtgcgctgggcatggatatggtgcgttttgaggccagcaccaataga
ggcatggcacaagggcccatcgaccggattgcctcaggaggagaactggcccgttttcta
ctggctttgaaggttgcgctcgaagatagcaacacatcacggacactgatttttgacgaa
gttgatagcggggttggtggcgcggttgccgcagctgttggcgaccgccttgcccgcctt
ggcgaacatatgcaaacgctggtaatcacccattcgcctcaggttgcggcacgcggcgtt
aatcatatgcgcattgccaaacatgtaacggatgaaagcgttattagcggaaccgaaacg
ctgagtgacgacgcgcgcaccgaagaaatcgcccgcatgctggctggcgagcatatcacc
gccgaagcccgggcagctgcaaccgctttgcttgagggctag
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