Candidatus Puniceispirillum marinum: SAR116_2331
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Entry
SAR116_2331 CDS
T01207
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00470
D-Amino acid metabolism
apb00550
Peptidoglycan biosynthesis
apb01100
Metabolic pathways
apb01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAR116_2331
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
SAR116_2331
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
SAR116_2331
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
apb01011
]
SAR116_2331
Enzymes [BR:
apb01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
SAR116_2331
Peptidoglycan biosynthesis and degradation proteins [BR:
apb01011
]
Precursor biosynthesis
Amino acid ligase
SAR116_2331
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_3
Thymidylat_synt
zf-U11-48K
Motif
Other DBs
NCBI-ProteinID:
ADE40574
UniProt:
D5BPS2
LinkDB
All DBs
Position
complement(2551253..2552161)
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AA seq
302 aa
AA seq
DB search
MSAHPSRVAVLMGGWTSEASVSRVSASFCGQAARSAGWDAVEVEVDRDIAEKLAEMKPDR
CFNALHGQVGEDGNIQGLLNIMNIPYTHSGLVASALAMDKVLAKMIMTTCGIRVPATLAL
VEDTHVYPEHAMQAHVIKPLNDGSSFGVVIVKDGDKAPARSLWNTDTQLLCEPFIPGREL
TVAVLEGTALCVTEITSENSFYDFDAKYAPGGSQHILPADIPEDVTLQACEWAESAYRAF
GCRGVIRADYRWNDVTNQLFMLEINTQPGMTATSLVPEQARFVGMTGEELVNHLLETAQC
DD
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atgagtgcgcatcctagtcgtgttgccgttcttatgggcggatggacatccgaggcatcg
gtcagtcgtgtttcagcaagcttttgcggacaggcagcgcgttcggctggttgggatgct
gtcgaagtcgaagttgatcgtgatattgccgaaaagctggccgagatgaaacccgaccgt
tgctttaacgccctgcatggacaggttggcgaagacggcaatattcagggtctgctgaac
atcatgaatattccctatacgcatagcggtctggtggcctcggcgctggcaatggataag
gtgctagccaagatgattatgaccacatgtggcatcagggtacccgccaccctagcattg
gttgaagatacccatgtctatccggaacatgccatgcaggcgcatgtgatcaagccactg
aatgacgggtcaagttttggcgttgttattgtcaaggatggtgacaaggcacctgcacga
agtctgtggaatactgatacccagctattatgcgaaccgtttattcccgggcgagaactg
accgttgcggtgcttgagggcacggctttatgcgttaccgaaatcacctctgaaaacagc
ttttatgattttgacgccaaatatgccccgggtggatcacaacatattctgccagctgac
attcccgaagatgtgaccttgcaggcctgtgagtgggctgaaagtgcctatcgggccttt
gggtgtcgcggtgttatccgtgccgattatcgctggaacgatgtaaccaaccagctcttt
atgctggaaatcaatacgcaacctggcatgacagccacttcgctggtgcctgaacaggcg
cgctttgttggcatgactggtgaagaattagtcaatcatcttttggagacagcacaatgc
gacgattaa
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