Anaplasma phagocytophilum Dog2: YYY_06400
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Entry
YYY_06400 CDS
T02752
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
apd
Anaplasma phagocytophilum Dog2
Pathway
apd03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
apd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YYY_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apd03400
]
YYY_06400
DNA repair and recombination proteins [BR:
apd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YYY_06400
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
YYY_06400
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
DEAD
UVR
AAA_30
Helicase_C_2
UB2H
adh_short
Microtub_bd
Motif
Other DBs
NCBI-ProteinID:
AGR81650
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All DBs
Position
1432015..1433976
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AA seq
653 aa
AA seq
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MRHFKITSEFDAAGDQPEAIRKLSEGIERGVREQVLLGVTGSGKTFTMASVIEKRQCPAL
IVAHNKTLAAQLYEEMRMFFPNNAVEYFVSYYDYYQPEAYIPHSDVYIEKDALINEKIDM
LRHSATRSILERRDVIVVASVSCIYGLGSPELYSEMTIPLSVGMQIDLCQLKEKLVELQY
KSGSQCERGTFSVKGDIVTIFPSHHEDHVWRISMFGDVIESIQEVDNNLGIAVANLEKVK
VFPNSHYVTPRPTLMQALSRIEEELQECVINYRKNNKIIEAERILERTKFDIEMMKETGT
CKGIENYSRYLCGKAAGEPPNTLLDYLPVDSLMFIDESHITIPQIRSMYNGDRVRKANLI
THGFRLPSALDNRPLTFEEWESRKTTLVYVSATPGKYETERTSGVVVEQLIRPTGLVDPI
CIVKKASGQIADVVNESQATISEGYRVLVTALTKKMAENLSEHMREIGIKVAYLHSDVKT
LERMDIIAQLRTGEIDVLIGVNLLREGLDIPECALVCILDADKEGFLRSETSLVQTIGRA
ARNMNGRVILYADRVTKSMKAAIDETNRRRAVQESYNKAHGITPKSISKSVATSLKDRIT
VKGTKGSKSKSAAVTEEDIIKLQKEMLLHAENLEFEKALEIRNQINKLSQHKT
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgcgacattttaaaattacttctgagtttgatgcagcaggcgatcagccagaagcaatt
cgtaagttgtctgagggtattgagcgaggtgttcgggagcaggtattgctaggagtaacg
ggttctggaaaaacgttcactatggcttctgtcatagaaaaaagacaatgtcccgcacta
atagttgctcataataaaacgcttgcagcgcagctttatgaagaaatgcgcatgtttttc
cctaataacgcagttgaatattttgtatcttactatgactactaccagccagaggcgtac
attccgcacagtgatgtgtatatcgaaaaagacgcccttataaacgagaaaatagatatg
cttcggcattctgcaaccaggtcaatactggaaagaagagatgttatagttgtagctagt
gtgtcgtgcatatacggtttaggctccccagaactgtactcagagatgacaatcccattg
tctgtaggtatgcagatagacctgtgtcagttgaaagagaaattggtggaactgcaatac
aaaagtggctcacagtgcgagcggggaacttttagcgtcaagggagatattgttaccatt
tttccatcacaccacgaagaccatgtatggcgtatttcaatgtttggggatgttatagaa
tcaatacaggaagtagataacaatctcggaatagcagttgccaatcttgagaaagtaaaa
gtttttcccaatagccactatgtcactcctcgtcccacacttatgcaggctttgtcaaga
atagaagaggaactgcaagaatgcgttatcaactatcgcaagaataacaagataatagag
gcagagagaatattagagcgcacaaaatttgacattgaaatgatgaaggaaacaggcacc
tgcaagggcatagagaactactcccggtatctatgtggtaaggctgctggcgaaccccct
aatacactcttagactatctaccagtggattcgttgatgttcattgacgaaagtcacatc
acaatcccacaaatacgatctatgtacaatggcgatagggtgagaaaggcaaacctgata
acgcatgggtttaggttgccgtctgctctagataatcgtcctctcacttttgaagagtgg
gaaagtaggaagacaacattagtgtacgtttctgcaacgcctggaaaatacgagacagaa
agaacttccggtgttgtagttgaacagttaataaggcccactgggttggttgatccaatt
tgtatagtaaaaaaggcttcaggacagatagcagatgttgtaaacgaaagccaagccaca
atctccgaaggatatagagtgcttgtgactgctttgaccaagaagatggccgaaaatttg
tctgagcacatgcgggaaattggtattaaggttgcatatctgcattctgatgttaaaacc
cttgagagaatggacataattgctcaactgcgcacaggagaaatagatgttcttatagga
gtaaaccttttgcgtgaggggttagacatcccggagtgcgcgttggtatgtattttagat
gctgataaagaaggatttttgcgttccgaaacctcattagtgcaaactataggccgtgca
gctagaaatatgaatgggcgagttattctatatgcagatagagtaactaaatctatgaaa
gcagctatagatgagacaaatcgtagaagagcagtacaagaatcctataataaagcacac
ggtataactccaaaaagtatcagtaaatctgttgcgacaagtttgaaggataggattacc
gtaaaaggtacaaagggcagtaagtctaagagtgcagcagttacggaagaggacataata
aagttgcaaaaagaaatgctactgcatgcagagaatcttgaattcgaaaaagctctggaa
atacgtaatcagataaacaaactttctcagcacaaaacgtag
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