Alteromonas pelagimontana: CA267_001630
Help
Entry
CA267_001630 CDS
T06582
Name
(GenBank) HD domain-containing protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
apel
Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apel03019
]
CA267_001630
Messenger RNA biogenesis [BR:
apel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CA267_001630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
TraI_2
HDOD
DUF6829
Motif
Other DBs
NCBI-ProteinID:
QJR79585
UniProt:
A0A6M4MAI3
LinkDB
All DBs
Position
complement(384250..385101)
Genome browser
AA seq
283 aa
AA seq
DB search
MKINSLQPELSEAKKLARFKGFYCMAGFVVRFNEHGKPYWVITLMDAFTQFEIVATQIDC
NTKHFSHFGFVHVEATKVKTTVGDIYVADFIYAVDEIPEKYRHIRLIPRDASANHEDVTR
LVKIVECVEYEALRCFVAHTLIQSRIMVPFLRNPASLNYHHNYIGGLLRHSIRVAELFAK
NMVGRKEEKALGIVGALLHDIGKSVTLSESMIYTATGTMVNHDSLTLELCASALKLLSKT
NPRYADILRHIWTCEKEQFRYSTKLNIASQIQRFDREDSKEHS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaattcattgcagccagagctttcagaagcgaaaaagcttgctcgttttaaa
ggtttttactgcatggctggtttcgtagttagatttaacgagcatggtaaaccgtattgg
gtgattacgttaatggatgcatttacccagtttgagatagtagccacgcagattgattgc
aatacaaaacacttttctcactttggctttgttcacgttgaagcgacgaaagttaaaaca
accgttggcgatatatatgttgctgactttatctatgctgttgatgaaattccagaaaag
tacagacatatacgcttaattcctagagatgcttcggcgaatcatgaagatgtaacgcgc
ctggttaaaatagtagagtgcgttgagtatgaagcgttaagatgctttgtcgcgcacact
ttgattcaaagccgaataatggtgccatttcttcgaaacccagcaagcttaaattatcat
cataactatattggtggcttgttaagacacagcatacgagtggctgagttatttgcgaaa
aacatggttggtagaaaagaagaaaaggctttaggtattgttggagcgcttcttcacgat
ataggtaaatccgtcacattatctgaatctatgatctacacagctacaggaacaatggta
aaccatgactcgttaacgttagagctttgtgcttcagcgctgaaattactttccaaaaca
aaccctaggtatgctgatattttgcgccatatctggacttgtgagaaagaacagtttagg
tattccaccaagctaaatatcgcttctcagattcaacgattcgatagagaagactcaaag
gaacattcataa
DBGET
integrated database retrieval system
