Arcanobacterium phocisimile: JTE88_03880
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Entry
JTE88_03880 CDS
T07205
Name
(GenBank) type IIA DNA topoisomerase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
apho
Arcanobacterium phocisimile
Brite
KEGG Orthology (KO) [BR:
apho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apho03032
]
JTE88_03880
03400 DNA repair and recombination proteins [BR:
apho03400
]
JTE88_03880
Enzymes [BR:
apho01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
JTE88_03880
DNA replication proteins [BR:
apho03032
]
Prokaryotic type
DNA Topoisomerases
JTE88_03880
DNA repair and recombination proteins [BR:
apho03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
JTE88_03880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QRV03020
LinkDB
All DBs
Position
871244..873349
Genome browser
AA seq
701 aa
AA seq
DB search
MPQTKEEYTARHLSILEGLEAVRKRPGMYIGSTDSRGLMHCAWEIIDNAVDEATEGYADQ
ISITLYPDKSVEVIDNGRGIPVDEVPGTGMSGVEVVYTKLHAGGKFGGGSYSASGGLHGV
GASVVNALSQRLDVTVKRHGKTHEISFQRGESGTFKDDGEPSAQAKFMPATSESSLRVTG
KAGKKETGTRVRYWYDPQIFPADSQFSYESLVERVREKAFLVPGLTVRIRDVRGEEPVEE
EFTYDGGVVDFVEFLATDPAVTSTMHLTGEGSFTETIQVLDKKSGHLTSSEVERVCGVDI
ALRWGSGYDTIEESFVNIIATPKGGSHVAGFEQGLVKVVRNAIEQKTRQLKVTSRDARIE
KDDILAGLSAVVAVRFPEPQFEGQTKEILGTAPIRGIVAKVVETELSAILASTKRDQKTE
NSRLLEKVVAEMRARVAARTQKEISRRKNALETSSLPAKLADCRSEDVERSELFIVEGDS
ALGTAKLARNSEFQALLPIRGKILNVQKASPADILKNQEVSSIIQVIGAGSGRTFDLEAA
RYGKIIFMTDADVDGAHIRTLLLTLFFRYMRPLVEAGRVYAAVPPLHRIEVSGQGRRKGE
YIYTYSDAQLRQELTKLERSKRSYKEPIQRYKGLGEMDADQLAETTMDPEHRSLRRISMA
DEAALRYAEETFELLMGSEVAPRKEFIVEGASHISRDQIDA
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
gtgccacagaccaaagaagaatacacagctcgtcacctctccatcctcgaggggttagaa
gccgtacgcaagcgcccaggaatgtacatcggatcgactgattcgcgtggtcttatgcat
tgtgcgtgggagattatcgataatgctgttgatgaggccacagaagggtatgcagaccag
atttcgataacgttatacccggataaatccgttgaagttattgacaatgggcgtggtatc
ccagttgatgaagttcccggaactggcatgtctggtgtcgaagtggtctataccaagctc
cacgctggcggcaagttcggcggtggatcatactctgcatccggtggtctgcacggggtg
ggcgcatccgtagttaatgcattatctcagcgccttgacgtgacagtcaaacggcacggc
aaaacgcatgaaatttccttccaacgtggcgaatccggaacctttaaggacgatggcgaa
ccgagtgcgcaagcaaagtttatgccggctactagcgaatcaagtctgcgagttaccggt
aaagccggcaaaaaagagactggtactcgcgttcggtattggtatgatccgcaaatcttt
ccagcagattctcaattctcctacgaatcgcttgttgaacgtgtacgcgaaaaagcgttc
ttggtgcccgggttaacggttcgtattagggatgtccgtggcgaagaaccagttgaagaa
gaattcacttacgatggcggagtggtcgatttcgtagaattcctagcaactgatccagcc
gtgacctcaacaatgcacttgactggagaaggctctttcactgagacaatccaagttttg
gataaaaagagtggacatttgacgtcttctgaggttgaacgcgtatgtggtgtagatatt
gcactccggtggggaagtggttacgacacgattgaagagtcgttcgtcaatattatcgca
actcctaagggtggaagtcatgtggcaggctttgagcaggggctcgtcaaagtcgtgcgt
aatgccatcgagcaaaagacacgacagctcaaggtgacctcacgggatgcacgtatcgaa
aaagacgatattcttgccggccttagtgcagtggtggcagtgcgtttcccagagcctcaa
ttcgagggacaaaccaaagaaattcttggcactgcacctatccgtgggatcgttgccaaa
gttgttgaaactgagctgagtgccatcctcgcttcgactaagcgagaccaaaaaaccgag
aattcgcgtctgttggagaaagttgttgccgagatgcgggctcgggtagccgctcgcact
caaaaagagatctcgcgtcgtaaaaacgcgttagagacatcctcattgcccgcgaaactt
gctgattgtcgttctgaagatgttgaacgttcggagttgtttatcgttgagggagattcg
gcacttggaactgcgaaattggcacgaaattcagaattccaggcattacttccgattcgt
ggaaaaatcttgaatgtacagaaagcttctccggccgacatcttgaagaaccaagaagtt
tcgtcgatcatccaagtcattggtgctggatcaggtcgtactttcgatttggaagctgca
cggtatggcaagatcatttttatgactgatgccgatgttgatggtgcacacatacgtacc
cttcttttaacactcttcttccgatacatgcgtccgctcgttgaagcaggacgtgtctac
gctgcagtgcctcctttacaccgtatcgaggtgtctgggcaaggaaggcgtaaaggtgaa
tacatctatacctattcagatgctcagttgcgtcaagaacttaccaaactcgaacggtca
aagcgaagctacaaagaacctatccaacgttataaaggtctgggcgagatggatgccgac
cagttggccgaaacgacgatggatccagaacatcggtcgttgcgtcgaatctccatggca
gacgaagcagccctgcgctacgcagaggaaaccttcgaattattgatgggttcagaagtc
gctccacgtaaagagttcattgttgaaggtgcttcgcatatttcacgtgaccagatagac
gcctga
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