Acyrthosiphon pisum (pea aphid): 100159941
Help
Entry
100159941 CDS
T01076
Name
(RefSeq) nuclear pore complex protein Nup98-Nup96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100159941
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
api03019
]
100159941
03036 Chromosome and associated proteins [BR:
api03036
]
100159941
Messenger RNA biogenesis [BR:
api03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
100159941
Chromosome and associated proteins [BR:
api03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
100159941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Nup98_GLEBS
Nucleoporin_FG
Motif
Other DBs
NCBI-GeneID:
100159941
NCBI-ProteinID:
XP_008188663
APHIDBASE:
ACYPI001279
UniProt:
A0A8R2FD15
LinkDB
All DBs
Position
A1:91007402..91019904
Genome browser
AA seq
1784 aa
AA seq
DB search
MFGSGSGAFSGATGNTSGFGQSAFGKPAAPAVFGQTNTSLFNQTTQPNTGLFGSTAAAPA
FGQTPTAQPTFGGFNTGGTSLFGTPTATSASTGGLFGQQNASMGGNTGGGLFGSSNPNTS
FGQSKPVGTGFAFGTPVAQPTGNIFGTPQASTAGTGMFGASTTGTFGATTGFGATSAGGT
TIKFNPVTGTDTMVRNGVNQTINTRHQSITVMKEYDTKIFEELRFEDYSANRKVGQQGAV
GGGIFGSPKTLFSSTTTTSTGLFGANDNKPLFGATSTTPALGGFGNTGTSNVFGAQNSIF
GKPQQPTSAFSTQPSTQPFGMNTTQPNIFGSNTAQTAKPFGVAAPQTNIFGSTAPSTFGT
QTTGFGQTGFGQPAQNNLFGQNKPAFGLGSTQTTTGFGFGTNTSTSANGLFGSKPANTGF
QMTTPAFGTNNAFGSTSTAQPATGGLFGSNAFNKAPTTSLFNQPTNQQTGVFNNAAKPGG
LFGQGTQGSGLFGSSNPSTFGTGGTSFFGNSQQAGGIGLFGNTNNVQLSTNQASQSNQMQ
LQLDTLKAMPYGDSPLFKRFYKDVSKVDDSSLVRSQSVSFEKFGSYKVSPIPTPKRIPQI
RRNFPQFNRKSLFDGLEESPPTMKCRDKVGDNSLLLNVSSPRSGCKKLNLKKDINDCSKL
NNGNSIIMHTKPLAKLEQYFYNKQNSPEDSSHTVNLSLIEENNTISQLQSNKQNNLNTSK
GTEANETSRNNITDTVVNDNQEPSIDPNSPEAEDHPTGIKLRRVGYYTIPPMNELAELVD
DDGSCFVDGFTIGRYDFGNVYFPDRLNVAGLDLDTIVHIRHREIIIYQDDELKPPLGEGL
NRKATVTLDRVWPNDKTTKQPITNPDRIAATNFVVKLQRACAKLSTQFVDYRPDTGSWVF
NVEHFSKYALVDSDDDDENIVERTIESKSILQKPKTIKSTENVSPKQNVMKPLLDLSVGL
DRAQLPHQYLLKPNFQLSAVNELTNDSHMHYYDTNKENSINVTAQLSQQMNLKASKIQCM
KASFDDIFYNELELMNQDDDTYGQKDKFEDKLEKILETIPECLISPKTQDNTSKSKSVIT
SVDNQSSPKFIITKQKNKVVQAVELIKPVLTAPLQAQRFNLLYNSNVRLPFEVELDNTCE
STKLALLNNLSTKVPWSGNLTFITINTKSKGSCLPKKGLDISYLSTELSGRAKNDSSSTI
VQKLQVITPVQTETFIELLNEHLEICMMNSNCDAKNGNIPYFYPTFGVDALHSHCYLLSH
FSELPEEEHYAHVWELIKALWGDPENLYTKDCPQEHVYNMARRQAVSDWLENILEKTENS
NNADENVSQRILNLVSIHKIMEASNLAISNNEFILAILLSQLGSENSVRCCIQRQLWQWF
NSKADLFMDTDHLKLYTMISGQPLFDSNQGIINVCENLNWIRAFAIHLWYIQPSTSTIGE
VLDAYQNSFESDDSYALKPYKTYDGIIDIDDKFATYDVCYHLLKLYTDSAYQMDKIINPF
THTRDPLDYNFSWLLYNTLQSLGYTQMSETYANQLHINFASQLVSHGQWQWAVFVLMHIK
DEQLRESLVEEFIGRNVELPVCDIYEISLSEKETFVIEKLNVKEIIIFNAKAILAVSQKK
YLEAAICYLKAEQWQEAHNILSNHLFANYLLQKNGQKTLKHLLNWLIDGSKINGSIPTTL
QDSLTILEYLNLNENLSKMSVEKSITHIASLCDQVSCLPEITNKERMIKTELSSFITRQI
GQLISKIEPTNRKVLKFLVLPLNKLSMTDDYTTEELLNTLSEYI
NT seq
5355 nt
NT seq
+upstream
nt +downstream
nt
atgtttggttctggatcaggtgcattctccggcgcgaccggaaacacgtcaggatttggt
cagtcagcatttggtaagcccgcagcccctgcagtatttggtcaaacaaatacatcacta
tttaatcaaactacacagcctaatacgggattatttgggtctactgctgctgcgcctgca
tttggtcagacacctaccgctcaaccaacatttggaggtttcaataccggtggaacttca
ctgtttggaactcctacagcaacatcggcatctactggagggttatttggccagcaaaat
gcttcgatggggggaaatactggaggtggattatttggttctagtaatcctaatacttca
tttggacaatcaaaaccagttggaacaggattcgcttttggaacaccagtcgcgcagcca
actggtaatatatttggtacacctcaagcgagcactgcaggaaccggaatgtttggagct
tctactactggtacctttggtgctacaacaggatttggagcaacatctgctggtggcaca
accataaaatttaatcctgtaactggtactgatacaatggtcagaaatggtgtaaatcaa
acaattaatactagacatcaatcaataactgttatgaaagaatatgacacaaaaatattt
gaggaacttagatttgaagattattctgcaaaccgcaaagttggacaacagggtgctgtt
ggcggcggaattttcggatctcctaaaacgttgtttagttctacaacaacgacaagtacg
ggtttatttggagcgaatgataataaaccactttttggtgctacctcaacaacacctgca
cttggaggatttggaaacactggtacttcaaatgtttttggggcacaaaatagcatattt
ggaaaacctcaacaaccaacatcagcattttctactcaaccatctactcaaccatttggt
atgaatacaactcaaccaaatatttttggatctaatacagctcaaacagctaaaccattt
ggagttgctgctcctcagacaaatatatttggaagtactgctccttcaacttttggtact
caaactactgggtttggtcaaactggattcggacaacccgctcagaacaatttatttggt
caaaataaaccagcatttggtcttggatcaacacaaacaacaacaggttttggttttgga
actaatacatctactagtgcaaatggtctttttgggagtaaacctgctaatactggtttt
caaatgactactccagcttttggtacaaacaatgcttttggatctacatctacagcacaa
ccagctactggtggattatttggttctaatgcttttaataaggctccaaccacatcattg
tttaatcaaccaacaaatcaacaaacaggtgtatttaataatgcggcaaaacctggaggg
ttatttggacaaggaacacaaggaagtggactttttggatcttctaatcctagtactttt
ggtacaggtggtacatcattttttggtaatagccaacaagctggtggaattggacttttt
ggaaataccaataacgttcaactatctacaaatcaggcatcacagagtaatcaaatgcaa
ttacaactagacacattaaaagcaatgccatatggagattcacctttgttcaaaagattt
tataaggatgtatcaaaagtagatgattcatctcttgtgcgttcacaaagtgtatcattt
gaaaagtttggtagctataaagtttctccaataccaacaccaaagagaatacctcaaatt
cgtagaaatttccctcaatttaatcgtaagtccttatttgatggacttgaagaatctcca
ccaacaatgaaatgtcgagataaagtaggtgataattcactactacttaatgtttcctct
ccaagatcaggctgtaagaaattgaatttaaaaaaagacatcaatgactgtagtaaatta
aacaatggaaatagtataattatgcatacaaaaccacttgctaaattagagcaatatttt
tacaataaacaaaactcaccggaagatagttcacacactgttaatttgtctttaattgaa
gaaaacaacacaatttctcaattacaaagtaacaaacaaaacaatttgaatacttcaaag
ggaacagaagccaatgaaacttctcgaaataatattactgatactgtcgtcaatgataac
caagaaccttcaattgatcccaattctcctgaagcagaagatcatcctactgggataaag
ttaagacgtgttggatattatactattccacccatgaatgaattggcagaattagtagat
gatgacggatcatgttttgtagatggttttacaataggacgctatgactttggaaatgtt
tattttcctgatcgtttgaatgttgccggtctagacttggatactatagttcacataaga
catagagaaattataatttaccaagatgacgaactcaagccccctctaggagaagggtta
aatagaaaggctactgttactttggatagagtctggcctaatgataaaacgacaaagcaa
ccaatcactaaccctgatcgtattgcagctacaaattttgttgttaaacttcaaagagca
tgtgccaaactaagtactcaatttgtagattatcgtccggatacaggatcttgggtgttt
aatgttgaacatttctcaaagtatgcgcttgtagattctgatgatgatgatgaaaatatt
gtggaacgtactattgaatctaaatcaattttacaaaaacctaaaactataaaatcaaca
gaaaacgttagcccaaagcaaaatgttatgaaaccattgctagatctttctgttggtctt
gatagagctcaattaccacatcagtatttattaaaaccaaactttcaactctctgctgtt
aatgaactaactaatgattcacacatgcattattatgacaccaataaagaaaatagcatt
aatgtgactgctcagctatctcaacaaatgaatttaaaggcgtcaaagatacaatgcatg
aaagcttcatttgatgatattttttataatgagttagaattgatgaatcaagatgatgat
acatatgggcaaaaagataaatttgaagacaagttggagaaaattttggaaacaattcct
gaatgtttaattagccctaaaactcaagataatacttcgaaatcaaagtcagtaataaca
tcagtagataatcaatcatctccaaagtttatcatcacaaaacaaaaaaataaagttgtt
caagctgtagaattaataaaaccagttttaactgctccacttcaagctcaacggtttaat
ttgctatacaattctaatgttcggttaccatttgaagtagaacttgataatacatgcgag
tctactaaacttgcattgttgaataacttatcaacaaaagttccttggtcaggcaattta
acatttattacaattaatacaaaatctaaaggaagttgcttaccaaaaaaaggactggat
attagttatttatcaacagagttgtctgggcgtgcaaaaaatgactcttcttctacaatt
gtacagaagttacaagttattacccctgttcaaacagagacattcattgaattattgaat
gaacacttagaaatttgtatgatgaatagtaattgtgatgctaaaaatggcaacattcca
tacttttatccaacatttggagttgatgcattacattctcattgttatttgctgtctcac
ttctctgaactgcccgaagaagaacattatgctcatgtgtgggagctgattaaagcatta
tggggagatccagaaaatctgtatactaaagactgtcctcaagaacatgtgtacaacatg
gctagacgacaggcagtgtctgattggctagaaaatatattagaaaagacagaaaattct
aataatgctgatgagaatgtatctcagagaatattaaatctagtgtcaattcataaaatt
atggaagcttctaatttagcaatttccaataatgaattcatcttggcaatattattatca
cagttaggaagtgaaaattctgtcagatgttgcattcaacgacaactttggcaatggttc
aacagcaaagctgatctgttcatggatactgatcacctaaaattgtataccatgatttcg
ggtcaacctttatttgattccaatcaaggaataataaacgtgtgtgaaaatctaaactgg
atcagagcttttgccatacatttgtggtacattcaaccttcaactagtactattggagaa
gtattagatgcatatcaaaattcttttgaaagtgacgactcttatgctttaaaaccatat
aagacgtatgatggcattattgatattgatgataaatttgctacttatgatgtctgttac
catttactgaaactttacaccgattcagcataccaaatggacaaaattataaatcccttt
acacacacacgggatccgttggattataattttagttggcttttgtacaacacattacaa
tcccttggctatacacaaatgtctgaaacatatgccaatcaattacatataaattttgct
tcgcagttggtatcacacggacagtggcaatgggccgtatttgttcttatgcatataaaa
gacgaacaattgagagaaagtttagttgaagaatttattggaagaaacgttgaactaccc
gtttgcgatatctatgaaatcagtctttctgagaaagaaacctttgtaatagaaaagtta
aatgttaaagaaataataatatttaatgctaaggctattttggctgtgtcacaaaaaaag
tatttagaagccgcaatttgttaccttaaagctgaacagtggcaggaagcacacaatatt
ctttcaaatcacttatttgcgaactatttgcttcaaaaaaatggacaaaaaacattaaaa
catttgctgaattggttaatagatggttccaagataaatgggtcaatacccacaactttg
caagacagtttaactattttagaatatttaaatttaaatgaaaatttaagtaaaatgtct
gttgaaaaatcaataacacacattgcatcattatgtgatcaagtctcgtgtttgcctgaa
atcacaaataaagaaagaatgattaaaactgaattatctagttttataactcggcaaatt
ggacaactgatatcaaaaattgaaccaacaaatcgtaaggttttaaagtttttagttcta
cctttgaataagttatcaatgacagacgattacacaacagaagaattacttaatacctta
tccgaatatatttaa
DBGET
integrated database retrieval system
