Acyrthosiphon pisum (pea aphid): 100162535
Help
Entry
100162535 CDS
T01076
Name
(RefSeq) general transcription factor IIH subunit 2 isoform X2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03022
Basal transcription factors
api03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100162535
09124 Replication and repair
03420 Nucleotide excision repair
100162535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
api03021
]
100162535
03400 DNA repair and recombination proteins [BR:
api03400
]
100162535
Transcription machinery [BR:
api03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100162535
DNA repair and recombination proteins [BR:
api03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100162535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
Motif
Other DBs
NCBI-GeneID:
100162535
NCBI-ProteinID:
XP_001947532
APHIDBASE:
ACYPI003683
UniProt:
A0A8R2D3N9
LinkDB
All DBs
Position
A1:complement(92033555..92036000)
Genome browser
AA seq
388 aa
AA seq
DB search
MDETEVKEYRWEGGYEKTWEEVKEDEGGNVEWSVKEIIEKSKRLLATRQPNVRLGMMRHL
FVIVDSSNSMVEKDLKPTRQLCTYKLLQDFIQDYFDQNPISQLGLITTRNSSAERISELS
GNRKYHLEELKKTFGDFNYCNGLMSVQNSLEIALSVMKMLPSHTSKEILIIGSSLSSCDP
GEINTSIEMLKTHNIRVSMIHLAAEVRMFRHLCNETKGKHNVIVDDVHFKHILWSLVEPV
PLPNSVDASCVKMGFPQELEQKPPFTTCSCHLAEGGKLNAKGFFCPQCNSKYCELPVECK
CCGLILVSSLHLARSLHHLVPIKPFIKIELEEGSSAYCYGCRKRIKVPAENVYFCESCKK
HYCDGCDIYVHNTLHVCPGCAVKRDEKR
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaactgaagtaaaagaatatcgctgggaaggcggttatgaaaaaacatgggag
gaagtcaaagaagatgagggaggaaatgtcgaatggtcggttaaagagattattgaaaaa
tctaagcggttactggcaactcggcagcctaatgtccgcctgggcatgatgcgacatttg
tttgttattgtagacagttccaattcaatggttgaaaaggatttaaaacctactagacaa
ttgtgtacttacaaattgcttcaggatttcattcaagattattttgatcaaaacccaatt
agtcaacttggtctgataactacaagaaattcatctgcagagcgtatatctgaattgtct
ggcaatagaaaatatcatcttgaagaattgaaaaaaacttttggagattttaattattgc
aatggattgatgtctgtgcaaaactctttagaaattgcattatcagttatgaaaatgttg
ccttcccatactagtaaagaaatacttattattggatctagtttgagctcatgcgaccca
ggagaaataaatacatctatagaaatgcttaaaacccataatattagagtttcaatgata
cacttggctgctgaagtacggatgtttcgacatttgtgtaatgaaactaaaggcaaacat
aatgtaattgtagatgatgtacattttaagcacattctttggtcgttagtggaacctgtt
cctttaccaaattcagttgacgcatcatgtgtgaaaatgggttttcctcaagagttagaa
caaaaaccaccattcaccacttgctcctgtcatttagcagagggtggcaaattaaatgca
aaaggtttcttttgcccacaatgtaacagcaagtattgtgaattacctgtggagtgcaag
tgctgtggcctcatactcgtgtcttctttacatcttgctagatcattacatcatttggtt
cctattaagccatttataaaaattgagcttgaagaaggttctagtgcctactgctatgga
tgcagaaagagaataaaggtccctgctgaaaatgtatacttttgtgaatcttgtaaaaaa
cattactgtgacggctgtgacatttatgtgcataatacattacatgtgtgtccaggctgt
gctgttaaacgagatgaaaaaagataa
DBGET
integrated database retrieval system
