Acyrthosiphon pisum (pea aphid): 100165461
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Entry
100165461 CDS
T01076
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
api
Acyrthosiphon pisum (pea aphid)
Pathway
api03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
api00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100165461
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
api03041
]
100165461
Enzymes [BR:
api01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100165461
Spliceosome [BR:
api03041
]
Complex A
U2 snRNP components
U2 related factors
100165461
Complex B
100165461
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
100165461
NCBI-ProteinID:
XP_029347314
APHIDBASE:
ACYPI006412
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All DBs
Position
A3:complement(34883821..34892557)
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AA seq
994 aa
AA seq
DB search
MVRSGSDRVHRKRSRSRSRSPRRHRRSSRSRSRSPRHKIHKSINKRFKRIKRRDRKKSRS
PRRSRSPRNKRKSPERKPEEVPFDPTNPDKETEQKKLELEMQKRRERIERWRAERKKKEL
DSVKKDVRTTIMSNLQIPSKKWNLEDDSDEEEEAKNNAEKLIEEEEIDPLDAFMQGVQEE
VRKVNKVDGHRSNLSEKNSLNDLNQSPGVDTTSSGVVIVSGVAKKKDNNTRGELIEQNQD
ALEYSSEEEQEDLNVAAASLANKQKKELPKIDHAEISYLPFRKNFYVEVPEISRMTSEEI
EKYKEELEGVRVKGKGCPRPIKVWAHCGVSKKIMDNLKKHNYEKPTPIQTQAIPAIMAGR
DLIGIAKTGSGKTLAFLLPMFRHIMDQPPLEDTDGPIAIVMAPTRELCMQTGKEARKFTK
SLGLRVVSVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRVTYVVLDE
ADRMFDMGFEPQVMRVIDNVRPDRQTVMFSATFPRQMEALARRILQKPVEVQIGGRSVVA
KEVEQHVIIVEEEQKFMKLLEVLGVYYERGSCIVFVDTHENADTLLQKLLKASYPCMSLH
GAIDQYDRDSTIVDFKSGQIKLLVATSVAARGLDVKDLILVVNYDCPNHYEDYVHRCGRT
GRAGNKGFAYTLVSPDQERFAGDLIRALETSNVPVPESLRTMWLRYQAKQAAEGKQVHTG
GGFSGKGFKFDETEAVMANEKKKLQKAALGLQDSDDEDIEGDIDQQIETMLAPKRIVKEV
KASAIGLPNLTGLMEINGTPQASERLELAKRLASRIHIAKNLGPDAKGASQQTAEAILKG
GLASSHPVITAKTVAEQLAAKLNTRLNYQPKDDDGESECGDSPEAGVEEIFRKYEEELEI
NDFPQQARWRVTSKEALAQISEYSEAGITVRGTYYPPPKNPPEGERKLFLAIESTDELAV
SKAKIEITRLIKEELLKMQTSAHHMVNKARYKVL
NT seq
2985 nt
NT seq
+upstream
nt +downstream
nt
atggttcgtagcgggagcgatagagtccatcgtaaacgctcaagaagccgttcacggagt
cctcgtcgtcatcgtcgcagtagtagatctcggtctcgatcacctcgtcataaaatacat
aaatcaataaataaaagatttaaaagaattaaaagaagagacagaaaaaagtctagatct
cctcgtcgttcccggtcacctcgtaacaaaagaaagtcaccagagcgtaaacccgaagaa
gtgccttttgatccaaccaatccagataaggaaactgaacaaaaaaaacttgaattagaa
atgcaaaagcgtcgagaacgtattgaacgttggagagcagaacgcaaaaaaaaagaatta
gatagtgtaaaaaaagatgttcgaactacaatcatgtccaacctacaaataccttcaaaa
aaatggaatttagaagatgatagtgatgaggaagaggaagcaaaaaacaatgccgagaaa
ttgattgaagaagaagaaattgatcctttagatgcttttatgcagggtgttcaagaagaa
gtacgtaaagttaataaagtagatgggcatcgtagtaatttatcagaaaaaaattcattg
aatgatcttaatcaaagtccaggagttgacactactagttcaggtgttgtaattgtatct
ggagtagcaaagaaaaaagataataataccagaggtgaactcattgagcaaaatcaagac
gccttggaatattcatctgaggaagaacaagaagatttgaatgtagctgcagcaagtttg
gccaataaacaaaagaaagaattaccaaaaattgaccatgctgaaattagctatttaccg
tttagaaaaaatttttatgttgaagtgccagaaatatcccgtatgacttctgaagaaatt
gaaaaatacaaagaggaattagaaggtgttcgagtgaaaggaaaaggatgccctcgacca
ataaaagtatgggctcattgtggtgtgagtaaaaagattatggataatttaaaaaaacat
aattatgaaaaacctactcctatacaaacacaagctattcctgctataatggctgggcgt
gatcttattggtattgcaaaaactggaagtggcaaaactctggcgtttttattacctatg
tttagacacattatggatcagcctcctttggaagatactgatggaccaattgctattgtt
atggcacctactagagaactttgcatgcagactggaaaagaagcacgcaagtttacaaag
agcttagggttaagagttgtatcggtttatgggggtactggaatatctgaacaaatagcc
gaattaaaacgtggtgcagaaattattgtgtgtactcctggccgaatgattgatatgtta
gcagcaaataatggtagagttactaatttaagaagagtaacatatgtggtattagatgag
gctgatcgaatgtttgacatgggatttgaacctcaagtaatgcgagtaattgataatgta
cgtccagatcgtcaaactgtcatgttcagtgctacattcccacgtcagatggaagcttta
gctagacggatactacaaaaacctgtcgaagttcaaattggaggtagaagtgttgttgcc
aaagaagtagaacagcatgtaattattgtagaagaagaacagaaattcatgaaattactt
gaagttttaggagtctattatgaaagaggaagttgtattgtgtttgtagatactcatgag
aatgcagatacgcttctacaaaaattattaaaagcctcctacccgtgtatgtcattacat
ggtgctatagatcaatatgacagagatagtactatagttgattttaaaagtggtcaaatc
aaattgttggttgctacttctgttgctgctagaggattagatgttaaagacttgatattg
gtggttaattatgattgtcccaatcattatgaagattatgttcatagatgtgggagaact
ggaagagcaggtaataaaggatttgcttacacattagtttcacctgaccaagaaagattt
gctggcgatttaataagagctttggaaacatctaatgtacctgtaccagaatcattgcgt
actatgtggctacgttaccaagcaaaacaagccgcagaaggaaagcaagttcatacaggt
ggcggctttagtggaaaaggatttaaatttgatgaaacggaagctgttatggctaatgaa
aagaaaaaattacaaaaagctgctcttggtcttcaagattctgatgatgaagacatagaa
ggagatattgatcaacaaattgaaacaatgcttgcccctaagagaattgtaaaagaagta
aaagctagtgctataggacttccaaatctaacaggcttaatggaaataaatggaactcct
caagcatcagaacgactcgaattagccaaacgtttagcttcgcgtatccatatcgctaaa
aaccttggaccagatgccaaaggtgcatcacaacaaactgcagaagctatattaaaggga
ggtcttgctagttctcatccagttatcactgctaagactgttgctgaacaattagcagct
aaattaaatactcgattgaattaccaaccaaaagatgatgatggtgagagtgagtgtgga
gatagtcctgaagcaggggtagaagaaatatttagaaagtatgaagaagaattagaaatt
aatgatttcccccagcaagctaggtggagagttacttctaaggaggctttagcacaaata
tcggagtattcagaagcaggaataacagttagaggtacttattatccaccacctaaaaat
cctccagaaggcgaacgtaagctatttttagctatagaaagtactgatgaattagcagtc
tctaaagcaaaaatagaaatcactcgtcttatcaaggaagaattattgaaaatgcaaact
tctgcacaccacatggttaataaagctcgatataaagtcttgtaa
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