Arcanobacterium pinnipediorum: NG665_00185
Help
Entry
NG665_00185 CDS
T08401
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
apii
Arcanobacterium pinnipediorum
Pathway
apii00521
Streptomycin biosynthesis
apii00523
Polyketide sugar unit biosynthesis
apii00525
Acarbose and validamycin biosynthesis
apii00541
O-Antigen nucleotide sugar biosynthesis
apii01100
Metabolic pathways
apii01110
Biosynthesis of secondary metabolites
apii01250
Biosynthesis of nucleotide sugars
Module
apii_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
apii00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NG665_00185 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NG665_00185 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NG665_00185 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NG665_00185 (rfbB)
00525 Acarbose and validamycin biosynthesis
NG665_00185 (rfbB)
Enzymes [BR:
apii01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NG665_00185 (rfbB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
Polysacc_synt_2
NAD_binding_10
adh_short
NmrA
Sacchrp_dh_NADP
KR
Ldh_1_N
DapB_N
Motif
Other DBs
NCBI-ProteinID:
USR79452
LinkDB
All DBs
Position
complement(47633..48625)
Genome browser
AA seq
330 aa
AA seq
DB search
MKVLVTGGAGFIGANFVRQTVETMPDADVVVLDKLTYAGNPASIAGLERVTLIEGDIADR
DTVDSLVKDADVVVNFAAESHNDNSLNDPSPFIRSNIVGTFELLEAVRRHGTRFHHISTD
EVYGDLEIGEPRRFQPGDPYVPSSPYSSSKAASDHLVRAWVRSFGIEATISNCSNNYGPY
QHVEKFIPRTVTNLMDGIRPRIYGTGEQIRDWIHVRDHNAAVWAIINKGRLGETYLIGAD
GELNNLQVTQMILEEFGRPADDFDHVNDRPGHDQRYAIDNSKLVEETGWQPVFQNFADGL
HDTIEWYKAHEAWWRPAKDAVEAKYAKNGQ
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtacttgtcaccggcggagccggctttattggagcaaattttgttcgccaaacc
gttgagacgatgcctgatgccgacgtcgtcgttctcgataagctcacctacgccggaaac
ccagcctcaattgccgggctagaacgcgttacattgatcgaaggcgatattgcagatcgc
gataccgttgattcgttggtcaaagatgccgatgtggtggtcaatttcgccgccgagtcc
cacaacgataactccctcaacgatccatcgccatttattcgctcaaacattgtaggtacg
ttcgaactccttgaagcagtacgccgccacggcacccgcttccaccacatttctaccgac
gaagtctacggcgatctggaaatcggtgaaccgcgccgcttccaacccggtgacccctac
gtaccatccagcccctactcttcatctaaagcagcctccgatcacctggttcgtgcctgg
gtacgctcgtttggcatcgaagctaccatctcaaactgttcaaataattacggcccatac
cagcacgtggaaaagttcatcccacgaaccgtcactaatctgatggacggtatccggccg
cgcatttacggcaccggtgaacagatccgcgactggatccacgtccgcgaccataacgca
gccgtctgggctatcatcaataaaggccggttgggtgaaacctatcttattggtgctgat
ggtgagcttaacaacctccaagttacccagatgatcttggaagagtttggccgcccagcc
gacgacttcgatcatgttaatgaccggccaggccacgatcaacgctacgccatcgataac
tccaagctcgttgaagaaaccggctggcaaccggtattccaaaactttgctgacggcctg
catgacaccatcgaatggtataaggcacatgaagcctggtggcgcccagcaaaagatgcg
gttgaagctaagtacgctaagaacggtcagtag
DBGET
integrated database retrieval system