Anas platyrhynchos (mallard): 101801491
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Entry
101801491 CDS
T02816
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
apla
Anas platyrhynchos (mallard)
Pathway
apla03013
Nucleocytoplasmic transport
apla03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
101801491 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
101801491 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apla03019
]
101801491 (THOC1)
03041 Spliceosome [BR:
apla03041
]
101801491 (THOC1)
Messenger RNA biogenesis [BR:
apla03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
101801491 (THOC1)
Spliceosome [BR:
apla03041
]
Complex C
Other components
EJC/TREX
101801491 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
101801491 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
101801491
NCBI-ProteinID:
XP_027307777
Ensembl:
ENSAPLG00000016149
EnsemblRapid:
ENSAPLG00030005965
LinkDB
All DBs
Position
2:56435710..56453410
Genome browser
AA seq
664 aa
AA seq
DB search
MSPPLFSLPEARLRFTSSTREALHNKTIKPLLNAFNQIPGSENEKKCTLDQAFRVIVEEE
IINKAPCENLLAIISLAINGVTEGICTASTPFVLLGDVLDCLPLDQCDKIFTFVEKNVAT
WKSNTFYSAGKNYLLRMCNDLLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFN
LENVTVFNTNEHESTLGQKHSEERDEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQ
DYFRNPVQCYEKVSWKTFLKYSEEVLAVFKSYKLDDTQASRKKLEELKTGGEHVYFAKFL
TSEKLMDLQLSDSNFRRHILLQYLILFQYLKGQVKFKSSNYVLTDEQSLWIEDTTKAVYQ
LLSENPPDGERFSKMVEHILNTEENWNSWKNEGCPSFVKERSQPEFQLGPPDSKPMRPAR
KRPAPEDFLGKGPNKKILMGNEELTRLWNLCPDNMEACKSESREYMPTLEEFFEEAIEQA
DPENMVENKYKAVNNSNYGWRALRLLARRSPHFFQPTNQQFKSLPEYLENMVIKLAKELP
PPSEEIKTGEDEDEEDNDALLKENNESPEVQRDKALTGDQMEILASRLGEHWRALAPYLE
MKDSDIRQIESDSEDVRMRAKQLLVAWQDQEGAHATAENLISALSKAGLADLAESLSNDA
EGSS
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgtcgccgccgctcttcagcctgcccgaggcgcggctccgcttcacctcttctaccaga
gaggccctgcataacaaaactatcaaaccgctgctgaacgcatttaaccagattcctggg
agtgaaaatgaaaagaagtgtaccttggatcaagcttttagagttattgtagaagaagaa
ataataaataaagctccatgtgaaaatctcctggcaattatttctcttgctattaatgga
gtcacagaaggtatctgcactgcatcaaccccttttgtgcttctgggagatgttctggat
tgcttgcctttggatcagtgtgacaaaattttcacttttgtggagaagaatgttgctaca
tggaaatcaaatacattttattctgcagggaaaaattacttgctacgaatgtgcaatgat
ctcctaagaagactatcaaagtcacaaaacacagtcttctgtggaagaattcagctattc
ttggctaggttatttccgctttctgaaaaatcaggactcaacttgcagagtcagttcaac
ctggaaaatgtcactgttttcaataccaatgaacatgagagcacgttaggacagaagcac
tcagaggagagagatgaagggatggaggtagaagaaggtgaaatgggagatgatgaagcc
ccaacaagctgttccattccaatagattataacctgtatagaaaattctggtcacttcaa
gattactttagaaatcctgtgcagtgctatgagaaggtctcatggaagacttttcttaag
tactcagaagaagttttggcagttttcaaaagttacaaattggatgacactcaggcttcc
cgaaaaaagctagaagaactaaaaacaggcggagaacacgtgtattttgcaaagttccta
actagtgaaaagttgatggatttacagctgagtgacagtaactttcgccgtcacatcttg
ttgcagtatctaatactctttcagtatctgaagggacaggtcaaatttaaaagttcaaac
tatgttctaacagatgaacaatctctttggattgaagatactacaaaggcagtttaccag
cttctttcagaaaatccgccagatggggaaagattctcaaaaatggtagagcatatatta
aatacagaagaaaactggaactcatggaaaaatgagggctgcccaagctttgtgaaagaa
agatctcagccagagtttcagcttgggcctcctgattctaagccaatgaggcctgcaaga
aagaggccagctcctgaggacttcctaggaaaaggaccaaacaaaaaaatccttatgggg
aatgaggaactgacccgcctgtggaacttatgtcccgataacatggaagcttgcaaatct
gagagtagggaatatatgccaacgctggaggagttttttgaagaagctattgagcaggca
gatcctgaaaatatggttgaaaataagtacaaggctgtgaacaattctaactatgggtgg
agagcattacgactactagcacgcagaagtccccacttcttccagccaacgaaccaacaa
ttcaagagtttaccagaatatctagaaaacatggtaatcaaattagccaaggagctgcct
cctccttcagaagaaataaaaacaggcgaagatgaagatgaggaagataatgatgcttta
ttaaaggaaaacaatgaaagtccagaggtgcaacgggacaaagctttgacaggcgaccaa
atggagatccttgccagcaggctgggggagcactggagggccctggccccctacctggaa
atgaaggattctgacatccggcagatcgagtcggacagcgaagacgtgcggatgagggcc
aagcagctgctggtggcctggcaggatcaggagggcgcgcacgccacagccgagaacctg
atcagtgccctgagcaaagccgggctcgctgacctcgcggagagcctgagcaacgatgca
gagggcagcagctaa
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