Anas platyrhynchos (mallard): 101803943
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Entry
101803943 CDS
T02816
Symbol
RBFOX1
Name
(RefSeq) RNA binding protein fox-1 homolog 1 isoform X1
KO
K14946
RNA binding protein fox-1
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apla03041
]
101803943 (RBFOX1)
Spliceosome [BR:
apla03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
101803943 (RBFOX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fox-1_C
RRM_1
SPESP1
RRM_5
Motif
Other DBs
NCBI-GeneID:
101803943
NCBI-ProteinID:
XP_038042726
Ensembl:
ENSAPLG00000013263
EnsemblRapid:
ENSAPLG00030000759
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All DBs
Position
15:2552753..3443286
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AA seq
466 aa
AA seq
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MLQRTAASSRLIFSPQETTQKPHASGAYCFHDRRLLSDTKSECNSCVETEDRKSSKQQMS
CEKDQQRGNQEATAPPDTMAQPYASAQFAPPQNGIPAEYTAPHPHPAPDYTGQTTVPEHT
LNMYPPAQTHSEQSAADTNAQTVSGTATQTEDAAQTDGQQQTQSSENTENKSQPKRLHVS
NIPFRFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREKLHGTVVE
GRKIEVNNATARVMTNKKTVNPYTNGWKLNPVVGAVYSPEFYAGRVLLCQANQEGSPVYS
APSSLVYTSTMPGFPYPAATAAAAYRGAHLRGRGRTVYNTFRAAAPPPPIPAYGGVVYQD
GFYGADIYVGGRRGVDAETHVPGDYRGGYAAYRYAQPATATAAAYSDRNQFVFVAADEIS
CNTSAVTDEFMLQTPTTTHLLQQPPTALVPWLVYTEGDTAVLLHTK
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
atgctccagaggactgcagcttcttccaggctcatcttcagtcctcaggaaactacacag
aagccccatgcaagtggtgcctattgttttcatgatcggagacttctttctgatactaaa
tcagagtgcaattcctgtgtagaaactgaggacagaaaaagttcaaagcaacagatgagt
tgtgaaaaagaccaacaaaggggtaatcaggaagctacagcacctcctgacacaatggca
cagccttacgcctcagcccagtttgctcctcctcagaatggtatccctgcagaatacaca
gccccacatcctcatccagctccagactacacaggccaaaccactgttccagagcacacg
ttaaacatgtaccctcctgctcagacacactctgaacagagtgcagctgacacaaatgca
caaactgtctccggcacagccacacagacagaagatgcagcacagaccgatggccagcaa
cagacacaatcttctgaaaacacagaaaacaaatcacagccaaaacggcttcacgtctca
aatataccattccgattccgtgatccagatcttagacaaatgtttggtcaatttggtaaa
atcttagatgttgaaattatttttaatgagcgaggctcaaagggatttggtttcgtaact
ttcgaaaatagtgctgatgcggacagggcgagggagaaattacacggcaccgtggtagag
ggccgtaaaatcgaggtaaataatgcaacagcacgtgtaatgacaaataaaaagaccgtc
aacccttacacgaatggctggaaattaaatccagttgttggtgcagtttatagtccagaa
ttctatgcaggcagggtgctgctgtgccaggcaaaccaggagggatctcccgtgtacagt
gcccccagttcactagtatacacatccacaatgccaggatttccctacccagctgcaacg
gcagctgctgcttatagaggtgcacatctaagaggccgaggtcgcacagtgtacaatacg
tttcgtgcagcagcaccccctcctccaattccagcctatggcggtgttgtataccaggat
ggattttatggtgcagacatttatgtggggggaagaagaggagtggatgcagagacccat
gtcccaggggattataggggtggttatgctgcctaccggtatgcccagcctgccactgcc
actgcagctgcctacagtgacagaaatcaattcgtcttcgttgcagcagatgaaatttct
tgtaacacctctgcagttacggacgagtttatgctgcagacccctaccaccacacacttg
ctccagcagccacctacggcgttggtgccgtggctagtatataccgagggggatacagcc
gttttgctccatactaaatga
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