Anas platyrhynchos (mallard): 101804420
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Entry
101804420 CDS
T02816
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
apla
Anas platyrhynchos (mallard)
Brite
KEGG Orthology (KO) [BR:
apla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apla03021
]
101804420
03036 Chromosome and associated proteins [BR:
apla03036
]
101804420
Transcription machinery [BR:
apla03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
101804420
Chromosome and associated proteins [BR:
apla03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
101804420
SLIK complex
101804420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
CDH1_2_SANT_HL1
CHD1-like_C
Chromo
Helicase_C
DEAD
Motif
Other DBs
NCBI-GeneID:
101804420
NCBI-ProteinID:
XP_038025314
EnsemblRapid:
ENSAPLG00030016031
LinkDB
All DBs
Position
W:5576359..5668721
Genome browser
AA seq
1764 aa
AA seq
DB search
MNGHSDEERVRNSSGESSQSDDDSGSTSASGSGSSSGSSSDGSSSQSGSSDSESGSESSS
QSESESDTSGEKKQVQAKPPKIDGSEDLSSSEDSAGDSSSETKKKRHRDEDWQMSGSGSV
SGTGSDSESEEDREKSSCEESESDYEPKNKVKSQKPPRRIKPKNGKKNAGQKKRQLDSSD
DDDDDYDKRGSRRQATVNVSYKEAEEAKTDSDDLLEVCGEDVLQPEEDEFETIEKFMDSR
IGRKGATGAATTIYAVEADGDPNAGFEKSKEPGEVQYLIKWKGWSHIHNTWETEETLKQQ
NVKGMKKLDNYKKKYQETKRWLKNASPEDVEYYNCQQELTDDLHKQYQVVERIIAHSNQK
SAAGYPDYYCKWQGLPYSECSWEDGALIAKKFQACIDEYFSRNQSKTTPFKDCKILKQRP
RFVALKKQPSYIGGHESLELRDYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLN
YLFHEHQLYGPFLLVVPLSTLTSWQREIQTWAPQMNAVVYLGDITSRNMIRTHEWMHPQT
KRLKFNILLTTYEILLKDKSFLGGLNWVFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLI
TGTPLQNSLKELWSLLHFIMPEKFSSWEDFEEEHGKGREFGYASLHKELEPFLLRRVKKD
VEKSLPAKVEQILRMEMSALQKQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNH
CYLIKPPDDNEFYNKQEALQHLIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILA
EYLKYRQFPFQRLDGSIKGELRKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVI
FDSDWNPQNDLQAQARAHRIGQKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMD
TTGKTVLHTGSTPSSSTPFNKEELSAILKFGAEELFKEPEGEEEEPQEMDIDEILKRAET
RENEPGPLTVGDELLSQFKVANFSNMDEDDIELEPEQNLRSWEEIIPEVQRRRLEEEERQ
KELEEIYMLPRMRNCAKQISFNGNEGRCSRSRRYSGSDSDSVSERKRPKKRGRPRTIPRE
NIKGFSDAEIRRFIKSYKKFGGPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALR
DNAFGQERSGGGLGKVKGPTFRISGVQVNAKLVISHEEELAPLHKSIPLDPEERKRYVIP
CHTKAAHFDIDWGKEDDSNLLIGIYEYGYGSWEMIKMDPDLSLTQKILPDDPDKKPQAKQ
LQTRADYLIKLLNKDLARKEAQRLASAGNSKRRKTRSKKSKATKAAKLKEEIKSDSSSPP
SEKSGEDNELNIFHMDEIVSVKHPRKKVKAEKENEEKHEPDIGIKKEAEEKRETKEKEIK
RDLKREKKEKEDKKEFKYIKEKRENKVKESTQKEKEVKEEKVNEIKSENKEKNKKVPSLD
IPVHITATSEPVPISEESEELDQKTFSVCKERMRPVKAALKQLDRPEKGLSEREQLEHTR
QCLIKIGDHITECLKEYPNPEQIKQWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQ
QHNDQNISSNVNTQVIRNPDVERIKENTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGAAY
KKTDSRKRPYSAFSNGKDHREWDHYKQDSRYYSDSKHRKLDDHMSRDHRSNLEGSLKDSR
PHSDHHSHSDHRMHSDPCSISEYSHHKSSRDYRYHSDWQMDHRASGSGSRSPLDQKSPYG
SRSPFEHSSDHKNTPEHTWSSRKT
NT seq
5295 nt
NT seq
+upstream
nt +downstream
nt
atgaatgggcacagtgatgaagaacgtgtaagaaacagtagtggagagtcaagccagtca
gatgatgattctgggtcaacatcggcttctggatctggttcaagctctggaagcagtagt
gatggaagtagcagtcagtcaggtagcagtgattctgagtctggttcagagtccagcagt
cagtcagaatcagaatctgacacatctggagagaagaaacaagttcaagctaaaccacca
aaaattgatggatctgaggatttatcgagcagtgaagattctgcaggtgactcatccagt
gaaaccaaaaagaaaagacatagagatgaagactggcaaatgtctgggtcagggtcagta
tcgggaactggttctgattctgaatcagaggaagatagagagaaaagcagttgtgaagag
agtgaatctgactatgagccaaaaaacaaggtcaaaagccagaaacctccaaggagaatt
aagccaaaaaatggtaaaaagaatgcaggacagaaaaagaggcagcttgattcatcagat
gatgatgatgacgattatgacaagagaggatctcgtcgccaggcaacagtcaatgttagt
tacaaagaagctgaagaagctaagacagattctgatgacttgctggaagtttgtggagaa
gatgtcctgcagcctgaagaagatgaatttgaaactatagagaagtttatggatagtcga
attggccgaaaaggagccactggtgctgcaaccactatctatgcagtcgaggcagatggt
gacccaaatgctggttttgaaaagtcaaaggagccaggagaagttcagtatcttattaaa
tggaaaggttggtcacacatacataatacttgggaaactgaggaaaccctgaagcaacaa
aatgttaaaggaatgaagaaactggacaactataagaaaaagtatcaggaaacaaaacga
tggctgaaaaatgcttctccagaagatgtggaatattataactgccagcaggaacttaca
gatgatctacataaacaatatcaagtagtggaaaggataattgctcattcaaatcagaaa
tcagcagctggttatccagattactattgcaaatggcagggtctgccttactcagaatgt
agctgggaagacggtgctctcattgccaaaaaatttcaggcatgtattgatgagtatttt
agcagaaatcagtccaagaccactccatttaaggactgcaagattcttaaacagaggcca
aggtttgttgcactaaagaagcagccatcttatattggaggacatgagagtttagagtta
agagattatcagttaaatggactgaattggcttgctcactcatggtgcaaagggaatagt
tgtattcttgcagatgaaatgggtttgggaaaaacaatacaaacaatttcttttctgaac
tacctgttccatgaacatcaactgtatgggccttttttgctggtcgtgccactttctacc
ttgacgtcttggcaaagagagattcaaacttgggctcctcagatgaatgctgtggtttac
ttaggagatataactagcagaaatatgataagaactcatgaatggatgcatccacagacc
aaacgattaaaatttaatatacttctaacaacttatgaaattttgctgaaggataagtca
ttccttggtggtctgaattgggtgtttataggggttgacgaagctcatcgtttaaaaaat
gatgattcccttctgtacaagactttaatagacttcaagtctaatcatcgtcttcttatt
actggaacccctctgcaaaactccctcaaagagctttggtctttgctgcacttcatcatg
ccagaaaagttttcttcctgggaagattttgaagaggaacatggcaaagggagagagttt
ggttatgcaagtcttcacaaagaacttgaaccgtttctactcagaagagttaaaaaagat
gtagaaaagtctttacctgctaaggttgagcaaattttgaggatggaaatgagtgcatta
cagaagcaatattacaagtggattttaaccaggaattataaagccctgagtaaaggttca
aaaggcagtacctcaggctttttgaacatcatgatggaactcaagaagtgttgtaaccat
tgctacctcattaaaccaccagatgataatgaattctataataaacaggaggccttacag
catttaatacgaagcagtgggaaactaatccttcttgacaagctactgattcgtctacga
gaacgtggcaacagagtactgattttctctcagatggtgaggatgctagacatcctagca
gaatatttgaagtatcgtcagtttccttttcagagacttgatggatcaataaaaggggaa
ttgaggaaacaagcactggatcattttaatgcagaaggatcagaggatttctgctttttg
ctgtctaccagagctggaggattaggtataaacttggcatctgctgacactgtagttata
tttgattctgactggaatccacaaaatgatctgcaagcgcaggctagagctcataggatt
ggacagaaaaaacaggttaatatttatcggctagtcacaaaaggatcagtagaagaagat
attcttgaaagagccaagaaaaagatggtgttagatcacttagtgattcagagaatggac
actacagggaaaactgtactacatacaggctctactccttcaagctcaacaccttttaat
aaggaagagttatcagcaattttgaagtttggtgctgaggaactcttcaaagaacctgaa
ggggaggaagaggagcctcaggaaatggatatagatgaaatcctgaagagggctgaaact
cgagaaaatgagccaggcccattaactgtaggagatgagttactttctcagttcaaggta
gctaacttttccaatatggatgaagatgacattgaattggaaccagaacaaaatttaaga
agttgggaagaaatcattccagaagtccagcggcgacgattagaagaggaagaaagacaa
aaagaacttgaagaaatatatatgctcccaaggatgaggaactgtgcaaaacagattagc
tttaatggaaatgaagggagatgcagtaggagcagaagatattctggatctgatagtgac
tctgtctcagaaagaaaacgaccaaaaaaacgtggacgaccacgaactattcctcgagaa
aatattaaaggatttagtgatgcagagattagacgatttatcaagagttacaagaaattt
ggtggcccacttgaaaggttagatgctatagctagagatgctgagctagttgataaatcg
gaaacagaccttagacgtctgggagaacttgtacataatggatgcattaaggctttaagg
gacaatgcctttggacaagaaagatcaggaggtggacttgggaaagttaaaggcccaaca
ttccgaatatcaggagtgcaggtgaatgcaaagctagtcatctcccatgaagaagagttg
gcaccattgcacaaatccattcctttagatccagaagaaaggaaaagatatgtcatccca
tgccacaccaaggcagctcattttgatatagattggggtaaggaagatgattccaatctg
ttaataggtatctatgagtatggttatggcagctgggaaatgataaaaatggatcctgat
ctcagtttgacgcagaagattttacctgatgatccggacaagaaaccccaggccaagcag
ttacagacccgtgcagactacctcattaaattactgaataaagaccttgcaagaaaggaa
gcacagagacttgctagtgcaggcaattcaaagaggaggaaaacaagaagtaagaagagt
aaagcaacaaaggctgcaaaactaaaagaagaaataaaaagtgattcctcgtcaccaccc
tcagaaaaatctggtgaagataatgagttaaacatctttcatatggatgagattgtttca
gtgaaacatccgcgtaaaaaagtaaaagcagaaaaagaaaatgaagaaaagcatgagcca
gatattggtataaaaaaggaagctgaagaaaaaagagagacaaaagaaaaggaaattaag
agggatttgaaaagggagaaaaaagaaaaggaggataagaaagaatttaaatatattaaa
gaaaagagagaaaacaaagtaaaggaatccacacagaaagaaaaagaagtaaaggaagag
aaggtaaatgaaatcaaatctgaaaataaagaaaaaaataaaaaagttccatcgttggat
attccagttcatattactgcaactagtgaaccagttcctatatctgaagaatctgaagaa
ctggatcagaagacattcagtgtgtgcaaagaaagaatgaggcctgtcaaagcagcattg
aaacaactggatcgaccagagaaaggcctttctgaaagggaacagctagaacatactaga
cagtgcctaatcaaaattggggaccatattactgaatgtctaaaggagtacccaaatcct
gaacaaattaaacaatggagaaaaaacttgtggatttttgtctccaagtttacagaattt
gatgccagaaagctgcacaaactgtataaacatgcaatcaaaaaacgccaagaatctcag
caacataatgatcagaacattagcagcaatgtgaatacacaagtaattagaaatccagat
gttgaaagaattaaagagaatacaaaccatgatgacagtagcagggacagttattcttct
gatagacatttgtcacaataccatgatcatcataaggacaggcatcagggagctgcttat
aagaaaactgactctaggaaaaggccgtattcagccttcagcaatggaaaagatcataga
gagtgggatcactacaaacaagacagcagatactatagtgatagtaaacataggaagttg
gatgaccacatgagcagagatcacaggtcaaacctagaaggaagtttaaaagatagtagg
cctcattcagatcaccattcccattcagaccacaggatgcattcagatccctgttcaatt
tcagagtacagccatcataaatcttccagagattataggtaccactcagactggcaaatg
gaccacagagcttctggtagtggctcaaggtcaccattagatcagaagtctccttatggt
tcaagatctccatttgaacactcatcagatcacaaaaatacacctgaacatacatggagt
agccgaaaaacataa
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