Acanthaster planci (crown-of-thorns starfish): 110974752
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Entry
110974752 CDS
T05078
Name
(RefSeq) splicing factor 3B subunit 3-like
KO
K12830
splicing factor 3B subunit 3
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110974752
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110974752
03041 Spliceosome [BR:
aplc03041
]
110974752
03036 Chromosome and associated proteins [BR:
aplc03036
]
110974752
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
110974752
Spliceosome [BR:
aplc03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
110974752
Complex B
110974752
Complex C
U2 SnRNP specific factors
110974752
Chromosome and associated proteins [BR:
aplc03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
110974752
TFTC complex
110974752
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MMS1_N
CPSF_A
Nucleoporin_N
DUF356
Motif
Other DBs
NCBI-GeneID:
110974752
NCBI-ProteinID:
XP_022082283
UniProt:
A0A8B7XN80
LinkDB
All DBs
Position
Unknown
AA seq
1216 aa
AA seq
DB search
MFLYSLTLQRATGIVQAVHGNFAGTKQQEIVVARGKTLELLKLDPNTGKLHVVLTHEIFG
ITRALMPFKLTGGSKDYIVVGTDSGRIVILEYNQSKNSFDRVHQETFGKSGCRRIVPGQL
LAVDPKGRAVMIAAVEKQKLVYILNRDSQARLTISSPLEAHKSNTFCYNIVGVDVGFENP
MFACLEIDYEDADSDPTGEAAAATQQMLTYYELDLGLNHVVRKYSEPLEEHGNFLIAVPG
GSDGPSGVLICSENYITYKNLGDQPDIRMPIPRRRNDLDDPERGMIFVSSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEVRMKYFDTVPVATNMNVLKTGFLFLAAEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFAPRSLKNLVEIDQMESLSPIMNCQIADLANEDT
PQLYVASGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVKKLSDDEFDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSSSLIGDDSLLQIYPDGIRHIRADKRVNEWKTPG
KKSIVKCAVNQRQVVIALTGGELVYFEMDPTGQLNEYTERKEMSADVKCMSLGSVPAGEQ
RARFLAVGLDDDTVRIISLDQSDCLQPLSMQALPAPAESLCVVEMGGTEATESGERGMSG
GLFLNIGLHNGVLLRMVLDSVTGDLSDTRTRYLGSRPVKLFRIKMQGSESVLAMSSRAWL
SYWYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSNPL
TYTPRKFAIHPESNHVVVIESDHNAYTETTKAMRKQQMAEEMVEAAGDEERELAAEMAEA
FLQEDLPESLFGAPKAGPGMWASLVRLLNPVSGTTLDTVALEQNEAAFSLCVCKFANRGD
DTFVLVGTAKDVTLSPRTCSGGFIHAYQLVDDGKKLELLHKTPVDDVPSAICPFQGRVLV
GVGRLLRIYDLGKKKMLRKCENKHIPNFIINIQTSGHRIIVSDVQESVHFVRYKRPENQM
VIFADDTHPRWVTATTSLDHDTVAVADKFGNLSIIRLTSGTNDEVDEDPTGVKALWDRGL
LSGASQKSEIISNFHVGDTILSLQKATLIPGGSESLVYTTLSGAIGILVPFTSHEDHDFF
QHLEMHMRSEFPPLCGRDHISFRSYFFPVKNVIDGDLCEQFNSMDTGKQRSVADELDRNP
SEVSKKLEDIRTRFAF
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttcctgtactcgctgactctgcagcgggccacgggcattgtgcaggccgtccacggc
aactttgctggcaccaagcagcaggagatcgtggtggcgcgagggaagaccttggagctt
ctcaagttggaccctaacacgggcaaactccatgtcgtgctgacacatgagatttttggt
atcacacgagcgctgatgccgtttaagctgacaggaggcagtaaagattacattgttgtt
gggactgactctggccgaatcgtcatcttggaatacaaccagtccaagaattcttttgac
agggtgcatcaagaaacgtttggcaagagcggctgccgtcgcatcgtccccggccagctg
ctggccgtggaccccaagggccgcgctgtcatgatcgcggccgtggagaagcagaagctg
gtgtacatcctgaaccgcgactcccaggcccggctgaccatctcttccccgctggaggcc
cacaagtccaacaccttctgctacaacatcgtcggggtggatgtgggctttgagaacccc
atgtttgcctgcctggagatcgattacgaggatgccgattccgaccccaccggggaggcc
gccgcagccactcagcagatgctgacctactacgagctggacctgggcctgaaccacgtg
gtgaggaagtacagcgaaccgctggaggagcacggcaacttcctcattgcggttcccggt
ggcagcgatggcccaagtggcgtgctcatctgctccgagaactacatcacctacaagaac
ctcggggaccagcctgacatccgaatgcccatccctcggagacggaatgacttggacgac
ccagagaggggcatgatctttgtctccagtgcaacccacaaaacaaagtccatgttcttc
ttcctggcccagacggagcaaggcgatatcttcaaaatcaccttggaaacggacgaggac
atggtgacggaggtccgcatgaagtactttgacactgtgcccgtcgccaccaacatgaac
gtgctcaagacgggattccttttcctggccgccgaatttggaaaccactacctgtaccag
attgcccatctcggggacgacgacgacgagcccgaattcagcagcgccatgcccctggag
gaaggggacaccttcttctttgctccccggtctctcaagaacctagtggagatcgaccag
atggagagcctgtcgcccatcatgaactgccagattgcagatttggccaatgaagacacc
ccacagctctacgtggcgtcgggcagaggcccgcgatcatctctgagagttctccgccat
ggtctggaggtctcagaaatggccgtgtccgagcttccaggtaacccaaacgccgtctgg
accgtcaagaaactcagtgacgatgagtttgacgcctacatcatcgtgtccttcgtcaac
gctaccctggtcttgtccatcggcgagaccgtggaagaggtgacggattccggattcttg
ggcaccacgcccacgctgtcgtcctcactgatcggagacgactctctcctgcagatctac
cctgacggtatccgtcacatccgagcagacaagcgtgttaacgaatggaagacgccaggc
aagaagagcatcgtcaagtgtgccgtcaaccagcggcaggttgtcatcgcgctcactgga
ggggagctggtgtactttgaaatggacccaacgggacagctgaacgagtacacggaacgc
aaggagatgtcggccgacgtcaagtgcatgagtctcggcagcgtccccgccggcgagcag
cgggcccgattcctggccgtgggcctggacgacgacacggtccgaatcatctcactggat
cagtcggactgtctgcagccgctgagcatgcaagccctaccggcaccggccgagtcactc
tgcgttgtggagatgggcggcacggaggccaccgagtcgggagaacggggaatgagcgga
ggtctcttcctgaacattggactgcataatggcgtcctgttgaggatggtgctggactcg
gtcacaggagacctatccgataccaggacccggtacctgggttccagacccgtcaagctg
ttcaggatcaagatgcaggggtcggagtctgttctggccatgtccagccgggcctggcta
agctactggtaccagtcccgcttccatctcaccccgctgtcctacgagacgctggagtac
gcttcgggctttgcctcggagcagtgccccgaaggcatcgtggcaatctccacaaacact
ctcagaatcttggcgctggagaagctgggagccgtgttcaaccaggtgtccaacccgctg
acctacacgccacgcaagtttgccatccacccggagagcaaccacgtcgtggtcatcgag
tcggaccacaacgcctacacagagaccaccaaggccatgcgcaagcagcagatggccgag
gaaatggtggaggcggcaggggatgaggagagggagctggcggctgagatggcggaggcc
ttcctgcaggaggacctgccggagagcctgtttggcgcccccaaggccggcccgggcatg
tgggcctcgctggtgcggctgctgaacccagtcagcgggaccacgctggacacggtggcg
ctggagcagaacgaggcagccttcagcctgtgcgtatgcaaatttgccaatcggggtgat
gacaccttcgtcttggtcggcacagccaaggacgtgacgctgagcccgcggacttgctcc
ggtggcttcatacacgcgtaccagctcgttgacgacggcaagaaactggaactgctccat
aagaccccagtggacgatgttccgtcggcgatttgcccattccaggggcgtgtcttggtg
ggtgtgggcagactgctgagaatctacgacctgggcaagaagaagatgctccgcaagtgt
gaaaacaagcacatccccaacttcatcattaacatccagacctcgggccaccgcatcatc
gtcagcgacgtgcaggagagcgtccactttgtccgctacaagcgcccggagaaccagatg
gtgatctttgccgacgacacccacccgcgctgggtcacggcgacgaccagcctggaccac
gacacggtcgcggtggctgacaagtttggaaacctcagcataattcggctgacctcgggc
accaacgatgaagtggacgaggaccccacgggcgtcaaggccctttgggaccggggcctg
ctgagcggcgcctcccagaagtcggagatcatctccaacttccacgtgggcgacaccatc
ctgtcgctgcagaaggccacgctcatccccggcgggtcggagtcgctggtctacaccacg
ctgtcgggcgccatagggatactggtgcccttcacgtcacacgaggaccacgacttcttt
cagcatctggaaatgcacatgcggtcagagttcccgcccctgtgcggccgagaccacatc
tccttcaggtcctacttcttcccagtcaagaatgtgattgacggcgatctgtgcgagcag
tttaactccatggataccggcaagcagcgcagcgtggccgacgagctggacagaaaccca
agcgaggtctcaaagaagttggaagacatccggaccagatttgcattttaa
DBGET
integrated database retrieval system
