Acanthaster planci (crown-of-thorns starfish): 110977574
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Entry
110977574 CDS
T05078
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110977574
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aplc03041
]
110977574
Enzymes [BR:
aplc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
110977574
Spliceosome [BR:
aplc03041
]
Complex A
U2 snRNP components
U2 related factors
110977574
Complex B
110977574
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Pribosyltran
Motif
Other DBs
NCBI-GeneID:
110977574
NCBI-ProteinID:
XP_022087505
UniProt:
A0A8B7Y594
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MPLKNRHYRRHSSSSSSSERTSRSRKKQKSRRKSHTSSSSSSSSSPSPDRGPSPSVKKHS
KSKGKSRESQSRSRSKSPAKSKSRRSKSKDRAGTPSEKKSSRSKGRSRTSRSRSRSRTPS
RSSKSRRSRSHSKDREEREREREKERERERERRREREKEREREREKERERERERERERER
ERERERERERERNRKRRARSRSRERKRSRSRSRDRRRSRSRSRDRKKRRSRSRSRERSDR
RRHSASRSPHRSSAKPEAAPAEAPKVKQEPGTADLKEAEVKKEAGPEIKEEVDAKPKVKE
EKGLPLEQKRLEEEMQRRRERIERWRQERKKTAELAMVKAEEQQQAEAVAQSSGKKWSLE
DDDDGDEDADDEAEDEEMDTSTTEPKPEVKTEPEDGTVKPEPAATEPKSKLEEAREKMEE
ARRKMEEKIRAKELKQEQAAAAAAAAVKEEENDDIDPLDAFMLGVNEEVKKINQMDRKKV
TGVAEDKTVELPAGDKTDGNGEVKKAKVSIMTGVAIKKKAAPIVVAKLTKGELMENDQDA
MEYSSEDEKESNLMDQVAALEQKKKKELAAVDHSKIQYKPFNKNFYVEVPELAKMTAEEA
EVKRAELEGIKVRGKGCPKPIDAWVQCGVSSKVLSVLKKNKYEKPTPIQAQAIPAVMSGR
DLIGIAKTGSGKTIAFLLPMFRHIMDQDALEMNEGPIAVILTPTRELAMQIYRECKKFTK
SLGLRVICVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAANNGRVTNLRRCTYLVLDE
ADRMFDMGFEPQVMKIIDSIRPDRQTVLFSATFPRAMEALARRILTKPIEVTVGGRSVVC
SDIEQHVIIIEEEQKFLKLLELLGMYQEKGSVLVFVERQESADLLLKDLMRASYPCLALH
GGIDQYDRDSIIQDFKSGNVSLMVATSVAARGLDVKQLILVVNYDCPNHYEDYVHRVGRT
GRAGNKGFSYTFIMPDQQRYCGDIIKALELSEQKPPPDLMALWTEYCDQQKAEGKKVMRN
SGFSGKGFKFDDTERELANEKKKLQKAALGLQDSDEEEAGMDIDDKIENMFAAKRRVKEV
SADEISVSLPNPTLVKPVDTANINQANLQLAKKMAERINRNLESVKQVSVVQQAAQAVMQ
GNTLVAPAVSGRTIAEQLAEKLNAKLNYVPKGTDEDVATEKEKQIFRKYEEELEINDFPQ
TARWKVTSKENLAQIQEYSEAGITIRGTYFPPGKEPKEAEGERKLYLAIESANELAVQKA
KAEITRLIKEELIRLQNSYQPINKGRYKVL
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgccgttgaagaacaggcactatcggagacattcaagttctagctcaagctcagaacgc
accagccgctcaagaaagaaacagaagagtcggaggaagtctcacaccagttcctcatca
tcgtccagcagttctccaagcccagaccggggaccaagtccatccgtcaagaagcattcc
aagagcaaagggaaatccagggaatcgcagtcacggtctcggtccaagagcccggccaag
agcaagagcagacggtccaagtcgaaggaccgagctgggacgccctcagagaaaaagtcg
tcaaggagcaaaggccgatccaggacctcacgctccagatcgcgatcccggaccccctcg
cgcagcagcaagagccgacggtccagatcccactccaaggaccgcgaggaacgagaacgg
gaacgtgaaaaagagcgcgagagagaacgggaaagacgccgtgagagggagaaggaacgg
gagagggagagggagaaggaacgggaaagggaacgagaacgggaacgcgaacgggaacgt
gaacgtgagcgggaacgtgaacgtgaacgggagagaaacaggaaaaggagggcacggtct
aggagcagagaacgcaagcgctcgcgctcccgcagcagggacagacggcgatcacgctca
cggagtcgcgaccgaaaaaagcgccggtcacgcagccgcagtcgggagcgcagtgatcga
cgacgccattcagcgtcccgtagtccccatcgcagcagcgccaagccggaggctgcccca
gctgaagcgccaaaggtcaagcaggagcctggcactgcagatttgaaagaggccgaggtc
aagaaggaggctgggccagagatcaaagaggaggttgacgcaaagccgaaggtgaaagaa
gagaaaggacttcctctggaacaaaaacgtctggaggaagagatgcagcgaagacgggag
cgcatcgagagatggagacaggagcggaagaagacggctgagctggctatggtcaaggca
gaggaacagcagcaagctgaagccgtcgctcagtccagtggcaagaagtggagccttgag
gacgacgatgacggggatgaagatgcagatgatgaggcagaagacgaggaaatggacacc
tccaccacagaaccgaagccagaagtaaagacagagccagaggacggcacagtcaagcca
gagccggcagccacggagcccaagagcaaactagaggaggctagggagaagatggaagag
gctcggcggaagatggaggagaagatccgtgccaaggagctgaagcaggaacaagccgct
gcagccgcagccgcagctgtcaaggaggaagaaaacgacgacattgatcccctggacgcc
ttcatgctgggcgttaacgaggaagtcaaaaagatcaaccagatggaccgcaagaaggtg
accggagtggccgaggataagaccgtggagttaccagctggagacaagacggacggaaat
ggagaagtcaagaaggcaaaggtcagcatcatgacaggggtcgccatcaagaagaaagcc
gctcccatcgtcgtggctaaactgaccaaaggcgagctgatggaaaacgaccaggatgcc
atggagtattcctccgaggatgagaaggagagcaacttgatggaccaggtggctgccctg
gaacagaagaagaagaaagaacttgccgccgtggaccactcgaagatacaatacaaaccc
ttcaataagaacttctatgttgaagtgccagagctggccaaaatgacggccgaagaggca
gaggtgaagcgagccgagctcgaaggtatcaaggtgcgagggaagggttgtcctaagccc
atcgatgcctgggtacagtgtggagtgtctagcaaagtactctccgtcttgaagaagaat
aaatacgagaagccgacgcccatccaggctcaggccatcccagctgtcatgtcgggtcgc
gacctgattggtatagctaagacgggcagcggcaaaaccattgcattcctccttcccatg
ttcagacacatcatggaccaggatgcgctggaaatgaatgaaggacccatcgctgtgatt
ctgacccctacacgtgagctggcgatgcagatctaccgggaatgcaagaagtttaccaag
tccctggggctgagggtcatctgtgtgtatggaggaacagggatcagtgaacagattgca
gagttgaagagaggggctgagattatcgtctgtactccggggcggatgatcgacatgttg
gcagccaacaatggccgcgtgaccaatctccgtcgctgcacttatctggttctggatgag
gcggacaggatgtttgacatgggcttcgaaccccaggtcatgaagatcatcgacagtatc
cggccagaccggcagacggttttgttctcggcgacgtttcctcgggccatggaagctttg
gcccgtcgcatcctgaccaaacccatcgaggtgacggtgggaggacggagtgtggtgtgc
tctgacatcgaacagcacgtgatcatcatcgaggaggagcagaagttcctgaagttgctg
gagctgctagggatgtaccaagagaagggcagcgtgctggtgtttgtcgaacggcaggag
tcagctgacctgctgttgaaggatctgatgagagcgtcttacccctgcctggcgctgcac
ggcggtattgatcagtacgacagagactctattatacaggatttcaaaagtggtaatgtc
tccttgatggttgccacgtctgtggccgcgcggggtctggacgtcaaacagctgatccta
gttgtcaactatgattgccctaatcactatgaggactatgtccacagagttgggcggacg
ggacgtgcaggcaacaaaggcttttcctacacattcatcatgcctgaccagcaacgttac
tgtggggacatcatcaaggcattagagctgagtgaacagaagccgccgccggacctgatg
gctctttggacggagtactgtgaccaacagaaagctgaagggaaaaaagtaatgcgcaac
agcggtttcagcggcaaggggttcaagtttgacgacacagaacgcgagctggccaacgag
aagaaaaagctgcagaaggcggcgctaggcctgcaagactcggacgaagaggaggccgga
atggatatcgacgacaagattgagaacatgttcgcagccaagcggcgcgtcaaggaggtg
tcagccgatgaaatctcggtctccttgcccaatccgaccctggtcaagccagtggacaca
gccaacatcaaccaggccaacctgcagctagccaagaagatggcagagcgcatcaaccgc
aacctggagagcgtcaagcaagtcagcgtagtgcagcaggcggctcaagctgtcatgcag
ggcaacacactggtagcacctgcagtctcgggccgcacaatagctgaacagttggctgag
aagttgaatgccaagctgaactatgtgccaaagggcacagacgaggatgtagccacagag
aaggagaagcaaatattccggaagtacgaagaggaactggagatcaacgatttccctcag
acggccaggtggaaggtcacgtccaaggagaatcttgctcagatccaagagtacagcgag
gcaggcatcaccatccgtggcacctacttccctcctggcaaagagcccaaggaggccgaa
ggagaacgcaagctgtaccttgccatcgagagtgctaatgaacttgccgtccagaaggcc
aaagcagaaatcactcgactcatcaaggaagaactaattagactgcaaaactcttaccaa
ccaatcaacaagggacggtacaaggtcttgtga
DBGET
integrated database retrieval system
