Acanthaster planci (crown-of-thorns starfish): 110979183
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Entry
110979183 CDS
T05078
Name
(RefSeq) general transcription factor IIH subunit 2-like
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03022
Basal transcription factors
aplc03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
110979183
09124 Replication and repair
03420 Nucleotide excision repair
110979183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aplc03021
]
110979183
03400 DNA repair and recombination proteins [BR:
aplc03400
]
110979183
Transcription machinery [BR:
aplc03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
110979183
DNA repair and recombination proteins [BR:
aplc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
110979183
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
110979183
NCBI-ProteinID:
XP_022090466
UniProt:
A0A8B7YD38
LinkDB
All DBs
Position
Unknown
AA seq
407 aa
AA seq
DB search
MADEEHEKAYTWEGDYEKTWEALREDEHGSLQTTVDDIIHRAKRRRLLDRPPNIRLGMMR
HLYVVLDLSRAMEDPDFRPSRLHCTIKLLEMFVEEYFDQNPISQIGFITTSDMRAEKLTE
LGGNPKRHIAALHKCKDKPCSKEPSLQNALDMAALSLRHMPSHASREILVVMGSLVTCDP
GNIHLTIKALKDLNIRCSVIGLAAEIRICRKLCTLTQGTYGIPLDETHFRDLLKEHTNPP
PATANTEPAPIRMGFPQHVLHTEKDKAEKPSMCMCHLDSKDHTGFSSSGYFCPQCRSKYC
ELPVECKVCALTLVSAPHLARSFHHLFPLADFVEVQRETFYTDHPLFCFACQSQLKDDTV
FQCSTCDHLFCLDCDLFIHESLHSCPGCASTRSELSRRGSGAHHLKR
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgaagaacatgaaaaggcctacacctgggaaggtgattatgaaaaaacatgg
gaggcccttcgagaggacgagcatgggtcccttcagacgacagtggacgacatcattcac
cgagccaagcggaggcggctgttggacaggccacccaacatcagactgggaatgatgagg
catctgtatgtggtgcttgacctgtcgcgtgccatggaagatccggacttcagaccaagc
cgtcttcactgcactatcaagttgttggaaatgttcgttgaagagtattttgaccagaat
ccaatcagccagattggcttcattacaacgagcgacatgagagctgagaaactcacagaa
cttggagggaaccccaagcgacacattgctgccttacacaaatgcaaagacaaaccgtgc
tccaaggaaccatctctacagaatgctttggatatggccgccttgtcgctcagacacatg
cccagccacgccagtcgggaaattctcgtcgtcatgggaagtttggtgacatgcgatcct
ggaaacattcatcttactatcaaggcactgaaggatctcaacattcgctgctctgtgatt
ggtctggcggcggagatcagaatctgccggaaactgtgcacgctgacccaagggacttac
ggaattcccctggacgagacccacttcagagacttactcaaggagcacaccaaccctccg
ccagctacggcaaatacggaaccagctcccatccgaatgggttttccacagcatgtgttg
cacaccgaaaaggacaaagcggagaagccttcaatgtgcatgtgtcatctggattccaaa
gaccacacagggttcagttctagtggttatttctgcccccagtgccgaagcaagtattgc
gagttgcctgtcgaatgcaaagtctgtgctctgacgttagtctctgccccccacctcgcc
cgctccttccatcatcttttcccgcttgcagactttgttgaggttcagcgggagacattc
tacaccgaccatccgctcttctgttttgcatgccaaagtcaactgaaggacgacacagtg
ttccaatgctctacatgtgaccatctcttctgcctggattgtgacctgttcatacacgag
tccctgcattcgtgccctgggtgtgcgagcacaaggtccgagctgtccaggagaggctcc
ggggcgcatcacctcaagaggtga
DBGET
integrated database retrieval system
