Acanthaster planci (crown-of-thorns starfish): 110985710
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Entry
110985710 CDS
T05078
Name
(RefSeq) THO complex subunit 1-like isoform X1
KO
K12878
THO complex subunit 1
Organism
aplc
Acanthaster planci (crown-of-thorns starfish)
Pathway
aplc03013
Nucleocytoplasmic transport
aplc03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aplc00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
110985710
09122 Translation
03013 Nucleocytoplasmic transport
110985710
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aplc03019
]
110985710
03041 Spliceosome [BR:
aplc03041
]
110985710
Messenger RNA biogenesis [BR:
aplc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
110985710
Spliceosome [BR:
aplc03041
]
Complex C
Other components
EJC/TREX
110985710
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
110985710
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Death
Motif
Other DBs
NCBI-GeneID:
110985710
NCBI-ProteinID:
XP_022102619
UniProt:
A0A8B7ZAB9
LinkDB
All DBs
Position
Unknown
AA seq
648 aa
AA seq
DB search
MAAPSFDFVSARQTFCEGIEQAFLSPGTEKLKQQSSTVDGSEAEKKVALDQAFRDVMVNL
VVKDSDCQHFTSLINLSIEAVHLGICSPATPFLLLTDVFESVPISVCDTVFRFVEERVDT
WKSNVLYTSGKNFLLRMCNDLLRRLSKSQNTVFCGRIQLFLARFFPLDEKSGLNLMSQFH
LENITSFNTEPLDGPLRSEDKDDTMEVEEGEMASSSSPIDYLLYRKFWALQDYFRNPTQC
YIKDKWRLFQRNARAVLGAFSSLKLDDITASKTQDETPTGKQVFFAKYLTSEKLYDLQLN
DVSFRRYVLLQFLILFQYLNQHVKFKGAQQVLTDDMSQFIKTTTETVYDLLKETSPGGEE
FAKTIQHILSREEHWNTWKNEGCPSYIREKPDSAQAQPKPRARKRSLGEELRINAPNKKI
DMGSPELTRLWNICPDNLEACRAENRIFIPSLEEYFEEAIEQADPGAMIEPEYKVVNNSN
FAWCALRLLARRSPYFFQTITSSQPPVKSVPAYLELMVTKLAKDMPQPTVEELKTEAVVE
ENDDLLKGGEEGLEKSNILLVEEVEAVSARLGENWKTLASELNFTDEEIGSIQTENLEIR
EQANAMMGAWLGREGEQATRDELIGALLESGLNDIVESVLTDNGKKDD
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggcggctccctcgtttgatttcgtgagcgctcggcagacgttttgtgaaggcatagag
caagcttttttaagtcctgggacagaaaagctgaaacaacaatccagcactgtggatgga
agtgaggctgaaaagaaggttgccttggatcaagcttttcgtgatgtcatggtgaattta
gtggtcaaagacagcgactgtcaacatttcacttccctcatcaacctctccattgaagca
gtgcatcttgggatatgttccccagccactccattcctcctgttgacagatgtatttgag
tcagtccccatcagtgtttgcgacacagtcttcagatttgttgaggagcgagtcgacacc
tggaaatcaaatgtgctttatacgtctggcaagaatttcctccttcgaatgtgcaatgat
ttgctgcgcagactttccaagtcccaaaacacagtgttctgtggccgcatccagttgttt
ctggcaaggttttttccactcgatgaaaaatcagggttgaacctcatgagtcagttccac
ttagaaaacatcacatccttcaacacggaacctctcgacggacctctgagatcggaggac
aaagatgacaccatggaggtcgaggaaggagagatggcatctagttcttcacccatcgat
tacctcctctatcgcaaattctgggccttacaagattacttccgcaaccccacccagtgc
tacatcaaggacaagtggcgcttattccaaaggaatgccagagctgtcttgggagcattc
agcagcttgaagctcgacgacatcactgcatccaagacacaagatgagacacccactggg
aaacaagtcttctttgccaaatatctcaccagtgagaaactctatgaccttcaactgaac
gatgtctcattcagacgctacgttcttctgcagtttctcatcttgtttcagtatctcaac
cagcatgtcaaattcaaaggggctcagcaggtgctcactgatgacatgtcccaattcatt
aagaccaccactgagactgtctatgacctcctgaaggagacatctccaggaggagaggaa
tttgccaagaccatccagcacatcttgagtagagaggagcactggaacacatggaagaat
gaaggctgtccgagttacatccgagagaagcctgattctgctcaagcacagcccaaacca
agggcaaggaagcgcagtctgggggaggagctgagaatcaacgcccccaataagaagatt
gacatgggaagccctgagctgactaggctatggaacatctgccctgacaacctagaggca
tgccgggctgagaacaggatcttcataccatctctggaggagtattttgaggaagcaatt
gagcaagctgaccctggcgccatgatagaaccagagtacaaagttgtgaataacagcaac
tttgcctggtgtgctctgcggctcttggccaggcgtagcccctacttcttccagactatc
accagctcccagccacctgtcaagtctgtgccggcatacctggagctgatggtcaccaaa
ctggccaaggatatgcctcaacctacagtggaagagttgaagacggaagctgtagtggag
gaaaatgacgacttgctgaaaggaggagaagaaggtcttgaaaaatccaacatcctcttg
gtggaagaggtggaggcagtgtctgcccgccttggcgaaaactggaagacgctggcctcc
gagcttaacttcacggatgaggagatcggtagcatacagacagaaaaccttgagatccgt
gagcaggccaatgccatgatgggagcatggctcggcagggaaggggaacaggccacacgt
gacgagctcataggagcattactggaaagtggactcaatgacatcgtagagtcagtgctg
acagacaacggaaaaaaggatgattaa
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