Agrilus planipennis (emerald ash borer): 108734866
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Entry
108734866 CDS
T07419
Name
(RefSeq) DNA ligase 4
KO
K10777
DNA ligase 4 [EC:
6.5.1.1
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
108734866
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apln03400
]
108734866
Enzymes [BR:
apln01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
108734866
DNA repair and recombination proteins [BR:
apln03400
]
Eukaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
DNA Ligase 4 complex
108734866
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
RNA_ligase
DNA_ligase_A_C
DNA_ligase_IV
BRCT_2
mRNA_cap_enzyme
BRCT
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
108734866
NCBI-ProteinID:
XP_018322080
UniProt:
A0A1W4WPW1
LinkDB
All DBs
Position
Unknown
AA seq
791 aa
AA seq
DB search
MNELASYFKFQELCDVLEAISAAKKPKEKKDILSKFIQQFKSKAVKLQPEISNSSFFPIL
RLILPHLERDRGPFGIKEFSFAKKLINMLSLKPDGPEASCLLNYQGHFKNVNIKDFADAA
FWILKKYYYKSSSLTILDINNGLDMLAQLHSSAEPRKFDETLFKLFRATSAKEQKWLIRI
ILKDMKLGIGQDSILNTFHPDAVEFYASNSSLTKVCGTLKDSSIRLNEIEIEIFTAFRVM
LSKRCDVNELVKISSSPNMLYYVETKFDGERFQLHMKDNTFKYFSRRGFDYTATFGDSFD
NGLFTPLLKNCFVSNVNSIILDGEMMGWNTKTQRFGSKGMNFDVKNLTESTTHQPCFCVF
DILLINDQVLTNKPLKQRTKILYENLKPIEGVIMLSKIGKATSQADLVNALNTSMDNEEE
GIVIKDPNSVYKMNDRNSGWWKVKLEYFEDVMSDLDVIILGGFYGSGRHRLNIRIFLVGI
GMSASGKPPKRFLAFARIQTGLSDEEYSVLDKKLGPFWRKMGDDNPSNYGIKFGKDKPDV
WIPPEHSCVLLVRGSELIKTSDFPSKYTLRFPRILSIRNDKAYYDCLNDQELEDLTIGSK
HVEKLNKRHLELDDLQIMTKKRRKVILKAKNLKDIEVKRNILDGYEFRVLTGNKEFSKDT
IEKLIIENGGNVVQNEGNKTFCLVAGYNDPRIQFYQEKGHFCDVAKLEWLLEVINSGRFK
MYGPFDLLSFTHKTRLQFLREYDQYFDSYTQEATEESIRKSVQLIKKKGHYINLMPNEVA
ELLRDLENATN
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaattagcatcgtattttaaattccaagaactatgtgacgtgttagaagccata
tctgcagctaaaaagccaaaagagaaaaaggatatattatccaaattcatccagcaattt
aaatcaaaagctgttaagctgcagcccgaaatatctaacagcagtttttttcccatctta
agattaatactgccccatcttgagcgagaccgcggtccttttggaattaaagagttttcc
tttgctaagaagttaataaatatgttgtctttaaaaccagatggacctgaagcttcttgc
cttctcaattaccaaggtcacttcaaaaatgttaatataaaagattttgcggatgcagcc
ttttggatattaaagaaatattattataaaagttcaagtctaactattctcgatataaat
aatggtttagacatgctagcacaactacattcgtcagcggaacctcgaaagtttgatgaa
acattgtttaaactttttcgtgccacttccgctaaagaacaaaaatggttgataagaata
attttaaaggacatgaaacttgggataggtcaggacagtatactcaacacgtttcacccc
gatgctgtcgagttttatgcttcaaacagcagtcttacaaaagtttgtggcactttaaaa
gattcatctatacgattaaacgagatagaaatagaaatatttacagccttcagagtcatg
ttgtctaaacgatgtgacgtaaatgaattggtaaaaattagcagtagtccaaacatgctt
tactatgttgaaacaaaatttgatggtgaaagatttcagttacatatgaaagataatact
tttaaatacttctctcgtagaggatttgattacactgccacatttggcgactcttttgac
aatggactttttactccccttttaaaaaattgctttgttagcaatgttaatagtataatt
cttgatggagaaatgatgggatggaatacgaaaacacaacgtttcggctctaaaggcatg
aacttcgacgtgaaaaacttaacagagtctaccacccatcagccttgtttttgtgtcttt
gatattctattaatcaatgatcaggtattaacaaataaaccactaaaacagagaactaaa
attttatatgaaaatttaaaacctatagagggggtaattatgcttagtaagattggaaag
gccacatctcaagcagaccttgttaatgctttaaacacatcaatggacaatgaggaggaa
ggaatcgttattaaagatcccaattctgtttataagatgaacgatagaaattcgggttgg
tggaaagtaaaactggaatacttcgaggatgttatgagtgatttagacgtaataattctc
ggtggattttatggctcaggaagacacagactcaacattcgaatctttttagttggaata
ggaatgtcagcttccggtaaaccccccaaaagatttcttgctttcgcaagaattcaaact
ggattaagcgatgaagaatattcagttttagataaaaaattaggtccattttggagaaaa
atgggtgacgataatccgtctaattacggaatcaaattcggtaaagacaaaccggatgta
tggattccgccagaacattcatgtgttttattagttagaggttctgaattaataaaaacc
tcagactttccctcaaagtatactttacgatttcctagaattctcagtatacgcaacgat
aaagcatactacgactgtctaaatgatcaagaactagaagatttaacaataggatcaaaa
cacgtagaaaaattaaacaaaagacatcttgaactggatgatctacagattatgacaaaa
aaaagaagaaaagtaatcttaaaagcgaagaatttgaaagatattgaagttaaacgtaac
atcctggacggttacgagtttagagtgttaactgggaataaggagttcagtaaagacaca
atagagaaactaattatcgaaaatggaggtaatgtagttcaaaatgaagggaataagaca
ttttgcttagtagcaggttacaatgatcctagaattcaattttatcaagagaaaggtcat
ttttgcgatgttgctaaattagagtggcttttggaagttataaacagtggacgatttaaa
atgtacgggccctttgatttgctctccttcacccataaaactcgtctacagtttttgaga
gagtatgatcaatacttcgattcctatacccaagaagccacagaagaatcgattagaaaa
tcagtacaattaataaaaaagaaaggacattacataaatttaatgcctaatgaagttgcc
gaattattgcgagatttagaaaacgctacaaattga
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