Agrilus planipennis (emerald ash borer): 108736058
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Entry
108736058 CDS
T07419
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
108736058
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apln03041
]
108736058
Enzymes [BR:
apln01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
108736058
Spliceosome [BR:
apln03041
]
Complex A
U2 snRNP components
U2 related factors
108736058
Complex B
108736058
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
108736058
NCBI-ProteinID:
XP_018323834
UniProt:
A0A1W4WIS9
LinkDB
All DBs
Position
Unknown
AA seq
999 aa
AA seq
DB search
MGRTVGRERSRSPDRKRRRSRSKEKSKSNRHRRSRSRERREKRSYSRERRRGESKEKRVS
GKSRKRERSRSRSRTPKDSKSKNDEHSELPFDPTNLDKEEEQKKLELEMQKRRERIERWR
AERKKKEQEIFKKEGVKNIGNIPQGTLKKWSLEDDSGEEDSVTEKEKEETEEKEKEEVKE
EEEPKPSEEPQPEEEELDPLDAFMQGVQEEVRKINKLDLKKNKSDVASSKKGMVIVTGIA
KTKINKDKGELIEQNQDGLEYSSEEEEEDLKDTAANIANKQRKDLIKIDHNHIHYAPFRK
NFYVEVPEIAKMSSQEVEAYREELEGIRMKGKGCPRPIKTWAQCGVSTKELNVLKKLGFE
KPTPIQAQAIPAIMSGRDLIGIAKTGSGKTLAFLLPMFRHILDQPPLEETDGPIAIVMTP
TRELCMQIGKDIKKFTKSLNLHAVCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLAAN
GGKVTNLKRVTYIVLDEADRMFDMGFEPQVMRIIDNVRPDRQTVMFSATFPRQMEALARR
ILLRPIEVQVGGRSVVCKDVEQHVIILEEEQKFLKLLELLGLYQQLGSILVFVDKQENAD
ILLKELMRSGYSCMSLHGGIDQFDRDSTIIDFKSGKVKLLIATSVAARGLDVKHLILVVN
YDCPNHYEDYVHRCGRTGRAGNKGFAYTFITPEQERYAGDIVKALELASVPVPDGLKQLW
ETYKTKQEAEGKKVHTGGGFSGKGFKFDESEAAAANERKKFQKAALGLQDSDDEDLENDI
DQQIESMFATKRTVKEIKAPIGIANPTSTVGMASALDKLELARRLASKINLTKNIGADTK
FATQQAAESILKGSGSHPLITAKTVAEQLAAKLNTKLNYQPKDEDDRNDDDAEQTFRKYE
EELEINDFPQQARWRVTSKEALAQISEYSEAGITVRGTYVPSGKNPPEGERKLYLAIEST
SDIAVSKAKSEITRLIKEELLKLQTAGHHTFNKARYKVI
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggggcgtactgttggaagagaaagaagtcgttcaccagatcgtaaacgtcgaagatct
aggagtaaagaaaaatcaaagtcaaatcgtcacaggagaagtagatcgcgagaaagaaga
gaaaaacgttcatacagtcgagaacgtagacgaggagaaagcaaagaaaaacgtgtgtca
ggaaagtctcgtaagagggagaggtcccgatcaagaagtagaactccaaaagattcaaaa
agtaaaaatgatgaacactccgagctaccttttgatccaactaatttagataaggaagaa
gaacagaaaaagcttgaattggaaatgcagaagagaagagaaaggatagaaaggtggaga
gcagagaggaagaaaaaggaacaagaaatattcaaaaaagaaggagtgaagaatataggt
aatattcctcaaggcacgcttaaaaagtggtccctagaggatgactctggtgaagaggat
agtgttactgaaaaggaaaaagaggaaactgaagagaaagaaaaagaagaagttaaagaa
gaggaggaacccaaaccatcagaagaaccacaaccagaagaagaagaactggatccttta
gatgcatttatgcaaggtgttcaagaagaagttaggaaaattaacaaactagatttgaaa
aagaacaaatcggatgttgcaagttccaagaagggaatggtaattgtaacaggaattgca
aaaaccaaaataaataaggacaagggagagttgatagaacagaatcaagatggattggaa
tattcttcagaagaagaagaggaagatttaaaagacacagctgctaatattgcaaataaa
caaagaaaagatcttattaaaatcgaccataatcatatccattatgcaccatttagaaag
aatttctatgttgaagtacctgaaattgccaaaatgagcagtcaagaagtcgaagcttat
agggaagaattagagggaataagaatgaaaggaaagggttgtccaagacctataaagaca
tgggcacagtgtggagtctccaccaaggaactgaatgtattaaagaagcttggttttgag
aaaccgactcctattcaagctcaagctattcctgcaataatgtccggtcgtgatctcatt
ggtattgcgaaaacgggaagtggtaaaactttagcatttttacttcccatgtttcggcac
atattagaccagcctcccttagaagaaactgacggccccattgccatcgtgatgacaccc
acacgggagttgtgtatgcaaataggaaaagacattaaaaagtttaccaaaagtttaaat
ttacacgccgtttgtgtttatggtggcactggcatttctgagcagattgctgagctaaaa
aggggcgctgaaataattgtatgcactccagggaggatgattgatatgttggcggcaaac
ggagggaaagttactaatttgaaaagggttacctatatagtactagatgaagcagacaga
atgtttgatatgggcttcgaacctcaagtgatgagaataatcgacaacgttcgtcctgat
cgtcagacggttatgtttagcgcgacttttccacgtcagatggaggcccttgcccgtcga
attcttttgcgtccaatcgaggtccaagtaggaggtcgttccgtcgtttgcaaggacgtt
gagcagcacgttatcattcttgaagaggaacaaaaattcctaaaattactggaattactt
ggactctaccagcagctcggtagcattttggtttttgttgacaagcaagagaacgctgac
attcttctcaaagagctcatgcgatctggttatagttgtatgagccttcacggtggaatc
gaccagtttgatcgcgattccactataatagattttaaatctggtaaagttaaattgctt
attgccaccagtgtggctgctcggggacttgatgtgaagcacttgatactcgtcgttaat
tatgattgtccaaaccactatgaggattatgtgcatcgctgtggaagaacagggagagca
ggcaacaaaggatttgcatacacatttattactcctgaacaggaaagatacgctggagac
attgtaaaagcattggaactagcttcagttccagtacctgatggtttaaaacagctttgg
gagacgtacaagacaaagcaggaagctgaaggtaaaaaggtgcatacgggaggtggtttt
agtggtaaaggttttaaattcgacgagtcggaagctgctgctgcaaacgagcgcaaaaag
ttccaaaaagccgcccttggactccaagattccgacgacgaagacctcgaaaacgatatt
gatcaacagattgaaagcatgtttgcaaccaaaagaactgttaaagaaatcaaagcccct
attggtattgcaaatcctaccagtacggtgggcatggcgtcggccctcgacaagctcgaa
ctggcgcgtcgtttggcgtcgaaaataaatctgaccaaaaacataggagctgacacaaaa
ttcgccacccagcaggcagctgaatcaatactaaaaggtagcggatcccatcctttgatc
acggccaaaacggtggccgaacaattggccgcaaaactgaacaccaaattgaactatcaa
ccgaaagatgaggacgacagaaacgacgatgacgccgaacaaacatttcgaaaatatgag
gaagaactcgaaatcaacgactttccacagcaagctaggtggagagtcacctctaaggag
gctcttgctcaaatatcggaatattcggaagctggtatcactgtccgtggtacgtatgtt
ccatcaggaaaaaatcctccagagggtgaaagaaagttgtacttggcgatcgagagtaca
agcgatattgcagtgtctaaagcgaaatccgaaattactagattaataaaagaggagttg
cttaaattacagacagcaggtcatcatacatttaacaaggcccgttataaagttatttaa
DBGET
integrated database retrieval system
