Agrilus planipennis (emerald ash borer): 108739094
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Entry
108739094 CDS
T07419
Name
(RefSeq) E3 ubiquitin-protein ligase COP1-like isoform X1
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
apln
Agrilus planipennis (emerald ash borer)
Pathway
apln04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
apln00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
108739094
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apln04121
]
108739094
Enzymes [BR:
apln01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
108739094
Ubiquitin system [BR:
apln04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
108739094
Multi subunit Ring-finger type E3
Cul4 complex
Target recognizing subunit (DCAF)
108739094
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
WD40_like
zf-RING_2
zf-RING_UBOX
zf-RING_5
zf-C3HC4_4
eIF2A
zf-ribbon_3
zf-RING_10
zf-rbx1
U-box
Sina_RING
zf-RING_6
Motif
Other DBs
NCBI-GeneID:
108739094
NCBI-ProteinID:
XP_025828996
UniProt:
A0A7F5QVB5
LinkDB
All DBs
Position
Unknown
AA seq
668 aa
AA seq
DB search
MATGGHDGRGSAGSTHSFGSNPTTRSSVRTPKRQRSAPGSSQSTEEKSDFLCPVCFNLIE
EAHITKCGHTFCYSCILKCIETMKRCPKCNSPLLSAEQIFPNFLLNDVIKKHKMRMNGLE
SLGLSRESSNEFSTLADGLRDFIASESQNLTLPDVNIMLEILTQRKQLLEAESCAAQNKL
LLEFLKLLLQQKEEQKNQIIKEVNIIKHDIDEVERILREVHSKCPTLEDVERAVGSASDG
DSAVRAMKKEMIEIIDNIESTTKKDDASFVPQAGSESTKHPGLSSLATRRRRMHAHFEDF
VQCYFTTRSKDLFFKDTEKSPKLTESSSSLNEFRENLVKFSRYNSLRPLATLNYSNDLFN
NSTIVSSIEFDKDNEFFAIAGVTKRIKVFDYNAVIQDSVDIHYPCMEMVSSSKISCVSWN
SYHKGTLASSDYEGTVTIWDASTGQRTKTFQEHEKRCWSVDFNDVDTRLIASGSDDARVK
LYSLNVEHSIATLEAKANVCCVKFNPRSSCHLAFGSADHCVHYYDLRNMKEPVSVFKGHK
KAVSYVKFLNSEEIVSASTDSQLKLWNINTPYCLRSFVGHINEKNFVGLATDGDYVACGS
ENNALYIYYKGLTKKLFSYKFEATRGVLENERREDEPNEFVSAVCWKQHSNVVVAANSQG
TINILELV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggccactggtggccatgatggacgtggaagtgcaggatctacacatagttttggcagc
aatccaacaaccagatcatctgtaaggacaccaaaacgtcagagatcagctccaggaagc
agccaatctactgaagaaaaaagtgattttctttgcccagtttgtttcaacttaattgaa
gaggctcacataacaaagtgtggacatactttttgctacagttgcatattaaagtgcatt
gaaacgatgaaacgatgccccaaatgcaactcaccacttctcagtgccgagcaaatcttt
ccaaatttccttctgaacgacgtcataaaaaaacacaagatgcgtatgaacggtttggag
tccttggggttgagcagagaaagttcaaacgaattttctacccttgccgatggtttacgt
gactttatcgcttctgaatcccaaaatcttacattaccagatgtgaatataatgctggaa
atattgacccagaggaaacaactactggaagctgaatcatgtgctgcacaaaacaaactg
ctcctggaattcttaaaactcttacttcaacagaaagaggagcaaaagaaccaaataatt
aaagaggtgaacataataaagcatgacattgatgaggttgaaaggattcttagagaagtc
catagtaaatgtcctactttagaagatgtagaaagggctgtaggatcagcttcagatggt
gattctgcagttcgagccatgaaaaaggaaatgattgaaatcatagataatatagaatca
actacgaaaaaggacgacgcatcatttgtaccccaggccggtagcgaaagtaccaaacat
ccaggattgtcctctttggccactagaagaagacgaatgcacgcacattttgaagatttc
gtccaatgttacttcaccaccaggtccaaagatttatttttcaaggataccgaaaaatct
cctaaacttaccgaatcttcttcaagtttgaacgaattccgagagaatcttgtcaaattt
tcacgttacaactcattaagaccacttgccaccctaaattattccaacgacctctttaac
aattctacaatcgtttccagcatagaatttgataaagataacgaattttttgcaatagct
ggagtcacaaaaaggataaaagtgtttgattataatgctgttattcaggactctgtggac
attcactatccttgcatggaaatggtatctagctcgaagatctcatgtgtgagttggaac
agttatcacaaaggtactcttgcttctagcgactatgagggcactgttactatttgggac
gcatctactggccagaggacaaaaacatttcaagaacatgaaaagagatgttggagcgtt
gattttaatgacgtcgacacccgacttatagcatccggatcggatgatgcccgagtgaaa
ttgtactctttgaatgtagaacattcaatagcaaccttagaagcaaaagcaaatgtctgt
tgtgttaaattcaatcctcgaagttcctgtcatctagcatttggaagtgcggaccattgt
gtccactattatgacctgagaaatatgaaggagcctgttagcgtgttcaaaggtcacaaa
aaagctgttagttacgttaaatttctcaacagcgaggaaatagtatcagcatcgactgat
tcgcagttaaaattatggaatattaatactccttattgtctgaggtcttttgtggggcat
attaatgagaaaaattttgtgggattggctacagatggcgactatgtcgcctgtggatcg
gaaaataacgccctttatatttattataagggtttgactaaaaaacttttcagttacaaa
tttgaagctacaagaggggttttagaaaatgaacgcagagaggatgaacctaatgagttt
gtatcagcagtgtgttggaaacaacactcgaatgtggtcgtagctgctaatagccaagga
actattaacattttagagctcgtttga
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integrated database retrieval system
