Pseudarthrobacter phenanthrenivorans: Asphe3_19880
Help
Entry
Asphe3_19880 CDS
T01435
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
apn
Pseudarthrobacter phenanthrenivorans
Pathway
apn03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
apn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Asphe3_19880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apn03021
]
Asphe3_19880
03400 DNA repair and recombination proteins [BR:
apn03400
]
Asphe3_19880
Enzymes [BR:
apn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Asphe3_19880
Transcription machinery [BR:
apn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Asphe3_19880
DNA repair and recombination proteins [BR:
apn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Asphe3_19880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADX73143
UniProt:
F0M1Z1
LinkDB
All DBs
Position
complement(2138699..2138959)
Genome browser
AA seq
86 aa
AA seq
DB search
MSTNLEGIINPPIDSLLEAADSKYGLVIFGAKRARQINAYYAQLHEGLFEYVGPLVDTKL
NEKSLSIALREINEGKLVSTPIEAAE
NT seq
261 nt
NT seq
+upstream
nt +downstream
nt
gtgtccacgaaccttgaaggcatcatcaacccgccgatcgactcgctgctcgaggcagcc
gattccaagtacggcctggtgattttcggtgccaagcgtgctcgtcagatcaacgcttac
tacgcccagctgcacgagggcctgttcgagtacgtcggcccgctggttgacaccaagctg
aacgagaagtccctctcgatcgccctgcgcgaaatcaacgaaggcaagctggtttccaca
ccgatcgaagccgcggagtaa
DBGET
integrated database retrieval system
