Archaeoglobus profundus: Arcpr_0468
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Entry
Arcpr_0468 CDS
T01152
Name
(GenBank) tRNA pseudouridine synthase D TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
apo
Archaeoglobus profundus
Brite
KEGG Orthology (KO) [BR:
apo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apo03016
]
Arcpr_0468
Enzymes [BR:
apo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
Arcpr_0468
Transfer RNA biogenesis [BR:
apo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Arcpr_0468
Prokaryotic type
Arcpr_0468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
ADB57534
UniProt:
D2RGV9
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All DBs
Position
400006..401289
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AA seq
427 aa
AA seq
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MITPTYSVEEVVGIRGYITSHEGINGIFKENPEDFYVEEVADLKIGEGDWVIIKVKKVNW
DTLNFVRVLSNKLRISQKRISYAGTKDKRAVSVQYFAVRIKSEDELERLKGLSIKDAEIE
VVGRTNRSIQLGDLKGNIFKVVIKNAKNVSNIPLIEGELRARGTPNFFGLQRFGSIRFIT
HEVGKYILKRDYETAFWVYVAKPFEGESEDARKVREILWNTRDVKFGLREMPKYLRYERT
LLQKLREGKSEKEALLSLPENLKMMFIHAYQSYVFNNVLSDRIAEFGNLKVVEKGDWVDF
VNLNDYYTFREDFVKVHDHNYKRVKFLIERGLCALAIPLPGYETPLGDDWTSERIRFYLE
RDGIDLKDFKHEYKEFSSKGSVRVADMLIEQTNLKYEVEENVTFSFYLPKGCYATVLLRE
FVKKPLA
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgataacccccacatattcggtggaggaggttgttgggataaggggctacataacttcg
cacgaaggaattaacggaatctttaaggaaaatccagaagacttctatgtagaagaggtt
gcagatttaaagattggagagggagattgggttattataaaggtgaaaaaggtaaactgg
gatacactgaatttcgtcagagtcctttcaaacaagcttaggataagccaaaagaggatt
agctacgctggaaccaaggataagagggcagttagcgttcaatacttcgctgtaaggata
aagagcgaagatgaattggaaagacttaaaggcttaagcataaaggatgctgagatagag
gttgttggaagaactaacagatctattcaactcggtgatttgaaggggaatatctttaag
gtcgtcataaaaaatgccaagaacgttagcaacattccactcatagagggggagcttaga
gctagaggaacgccaaattttttcggattgcaacgctttggttctataaggttcataacg
catgaagtgggaaagtacatactcaagagagactacgaaactgctttctgggtttacgtt
gcgaaacctttcgagggtgagagtgaggatgctaggaaggttagagaaatactgtggaat
actagagacgtcaagtttggcctaagggaaatgcccaaatacctcagatacgaaagaaca
cttctgcaaaagttgagagaaggtaagagtgagaaagaagctttgctttccttaccagaa
aacctcaagatgatgttcatacatgcctaccagtcctatgtttttaacaacgttctctca
gacaggattgctgaatttggaaatctgaaagttgtagagaaaggagactgggtcgatttt
gtaaacttaaacgattattacacgtttagagaagattttgttaaggttcacgatcacaac
tacaagcgtgtaaagtttttgatcgaaagaggattgtgtgctctagcaatacctctaccg
ggttacgagacacctttgggggatgactggacttcggagagaattcgattttacttggag
agggatggaatagatttgaaagacttcaagcacgagtataaggagttttcttcaaagggg
agtgtgagagttgccgatatgctaatagagcaaaccaacctgaagtatgaggtggaggag
aacgtcacatttagcttttatttaccgaaaggttgctacgcaactgttctattgagggag
ttcgttaagaagcctctagcctga
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