Ancylobacter polymorphus: K9D25_14960
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Entry
K9D25_14960 CDS
T08152
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
apol
Ancylobacter polymorphus
Pathway
apol03030
DNA replication
apol03430
Mismatch repair
apol03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apol00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
K9D25_14960 (dnaE)
03430 Mismatch repair
K9D25_14960 (dnaE)
03440 Homologous recombination
K9D25_14960 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apol03032
]
K9D25_14960 (dnaE)
03400 DNA repair and recombination proteins [BR:
apol03400
]
K9D25_14960 (dnaE)
Enzymes [BR:
apol01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
K9D25_14960 (dnaE)
DNA replication proteins [BR:
apol03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
K9D25_14960 (dnaE)
DNA repair and recombination proteins [BR:
apol03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
K9D25_14960 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF655
HROB
T2SSK
Motif
Other DBs
NCBI-ProteinID:
UOK70023
UniProt:
A0A9E7A5P0
LinkDB
All DBs
Position
3168064..3171498
Genome browser
AA seq
1144 aa
AA seq
DB search
MAQADVGFVHLHVHSSFSLLEGALSIGKLADLAKKDRQPAIALTDTGNLFGALEFSEKMA
GAGIQPILGCAVAVDFPGTAPRGPAGQERPRIVLLAMNEEGWTNLMELVSRSFLDTAADG
APHIKVDWLEGRAAGLIALTGGPIGPIDRALAAGSADHAEQRLATLHSLFGDRLYVEIQR
HGVAEERRVEPALIELAYRLDLPLVATNEPFFAAQDDYEAHDALICIAEGRLVAEPDRRQ
LTPEHRFRTRAEMADLFADLPEALANTVEIAQRCAYRPRTVKPILPRFTLDRDEAEELRL
QAEEGLRNRLAIHGPTEGLTVADYEARLAFELGIIERMKFPGYFLIVSDFIKWAKAQGIP
VGPGRGSGAGSLVAYSLTITDLDPLRFGLLFERFLNPERVSMPDFDIDFCQERRDEVIRY
VQQRYGRDQVAQIITFGTLQARGVLRDVGRVLEMPYGQVDKLCKLVPQNPANPVTLKQAI
TDEPRLQGESDSNPVVKRAFDIATRLEGLNRHASTHAAGIVIGDRPLARLVPLYRDPRSD
MPVTQYNMKWVEQAGLVKFDFLGLKTLTVLQTAVRLVAQRGITLDLSTIPLDDKKTYDML
TRGETVGVFQVESAGMRRALVDMKPDRLEDIIALVALYRPGPMANIPVYCAVKNGQEKAA
YAHPALEASLKETYGVIIYQEQVMQIAQTLSGYSLGEADLLRRAMGKKIRAEMDKQRERF
VSGAVERGVPKAKASEIFDLLAKFADYGFNKSHAAAYALVSYQTAYMKANYPTEFLAASM
TLDMGNTDKLAEFRQESQRLGIEVVPPSVNHSGRDFAVKDGRILYALAAIKGVGGHSVDA
IVEARGARPFTSLADFASRINAKALNKRTMESLVNAGAFDALEKNRARASAAIDCMLAHA
ASVGAEVASGQGNMFGGPSVAAELPIPSAAPWLPAEKLQREYDAIGFFLTGHPLDDYGKA
LDRLRVQRWTDFTRSVRAGSMAGRLAATVVSRQERRTKTGNKMGIVGLSDPSGQFEAVLF
SEALAQYRELLEPGKAVLLQVSAELQGEDVRARIQTVEPLDQAASKMQKGMRVFLRSPEP
LESVATRLGSLGGGRGDGEVSLVLLLGERGDTEVEVKLPGRFSLSPQIAGALKAVPGVEM
VEMA
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaagctgatgtcgggttcgtgcatctgcatgttcattcctccttctccctgctg
gaaggcgcgctcagcatcggcaagctcgccgatctcgccaagaaggaccgccagcccgcc
atcgccctcaccgacaccggcaatctgttcggcgcgctggaattctcggaaaagatggcc
ggcgccggcatccagccgattctcggctgcgccgtggcggtggattttcccggcacggcc
ccccgcggccccgccgggcaggagcgcccgcgcatcgtcctgctcgcgatgaacgaggag
gggtggacgaacctcatggagctggtgtcgcgctccttcctcgacaccgccgccgacggc
gccccccacatcaaggtggactggctggaaggccgcgccgccggtctcatcgctctcact
ggcggtcccatcggccccatcgaccgcgctttggcggccggcagcgccgaccatgcggaa
cagcggctggcgacgctccacagcctgttcggcgaccggctttacgtagaaattcaacgc
catggcgtcgccgaggagcgccgggtcgagccggcgctgatcgaactcgcctaccgcctc
gatttgccgctggtggcgaccaacgagccgttcttcgccgcccaggacgactacgaggcc
cacgacgcattgatttgcatcgccgaaggccgtctcgtcgccgagcccgaccggcgccaa
ctcacccccgagcaccggttccgcacccgcgcggaaatggcggacctgttcgctgatctc
ccggaagcccttgccaacacggtggaaatcgcccagcgctgcgcctatcgcccgcgcacg
gtgaagcccattctgccgcgcttcactctcgaccgcgacgaggcggaggagttgcggctg
caggcggaagaggggctgcgcaatcgcctggcgatccacgggccgacggaaggtctgacg
gtcgcggattatgaagcgcgactggctttcgagctcggtatcatcgagcggatgaagttt
cccggctacttcctcatcgtgtcggacttcatcaaatgggccaaggcgcagggaattccg
gtcggtccgggccgtggctcgggcgcgggctcgctggtcgcctattcgctgaccatcacc
gatctcgacccgctgcgcttcggcctgctgttcgaacgcttcctcaatcccgaacgcgtg
tcgatgcccgacttcgacatcgacttctgccaggagcgccgcgacgaggtgatccgctac
gtccagcagcgctacggccgcgatcaggtggcgcagatcatcaccttcggtacgttgcag
gcgcgcggcgtgctgcgcgatgtcggccgggtgctggaaatgccctatggccaggtcgac
aagctgtgcaagctggtgccgcagaacccggccaatccggtgacgctgaagcaggcgatc
accgacgagccgcgcctgcagggcgaaagcgactccaacccggtggtcaagcgcgccttc
gatatcgccacccggctggaagggctcaaccgccacgcctcgacccatgccgctggtatc
gtcataggcgaccggccgctggcgcgactggtcccgctctaccgagacccgcgctcggac
atgccggtcacccagtataacatgaaatgggtggagcaagccgggctggtgaagttcgac
ttcctcggcctcaagaccctcaccgtcctgcaaaccgccgtccgtctggtcgcccagcgg
ggaatcaccctcgacctgtcgacgattccgctcgacgataaaaagacttacgacatgctg
acgcgcggcgagacggtcggcgtgttccaggtggaaagcgccggcatgcggcgggcgctg
gtcgacatgaagccggaccggctggaggacatcatcgccctcgtcgccctgtaccggccg
ggcccgatggccaatatcccggtctattgcgcggtgaagaacgggcaggaaaaggcggct
tatgcgcatcccgcgctggaagccagcctgaaggagacctacggcgtcatcatctaccag
gaacaggtgatgcagatcgcgcagacgctctcgggctattcgctgggcgaagccgacctg
ctgcgccgcgccatgggcaagaagatccgcgccgaaatggacaagcagcgcgagcgcttc
gtcagtggtgcggtggagcggggcgtgccgaaggcgaaggcgtcggagattttcgacctg
ctcgccaaatttgccgattacggctttaacaagagccacgcggccgcctatgcgctggtg
tcctaccagaccgcctatatgaaggcgaactacccgaccgagttcctcgccgcctccatg
acgctcgacatgggcaataccgacaagctcgcggaattccggcaggaatcgcagcggctc
ggcatcgaggtcgtgccgccctcggtgaatcactccgggcgcgacttcgccgtgaaggac
ggacgcattctctatgcgctggcggcgataaagggggtcggtgggcactcggtcgacgcc
atcgtcgaggcgcggggcgcgcgccccttcaccagcctcgccgacttcgcctcgcgcatc
aacgccaaggcgctgaacaagcggacgatggaaagcctggtcaatgccggggcgttcgat
gcgctggagaagaaccgcgcccgggcctcggcggcgatcgactgcatgctcgcccatgcg
gcatcggtcggggctgaggtggcatcggggcagggcaatatgttcggcgggccgtcggtc
gcggcggaactgccgattcccagcgccgcgccgtggctgccggccgagaagctccagcgc
gaatacgacgccatcggcttcttcctcaccggccacccgctggacgattacggcaaggca
ctggaccggctgcgggtgcagcgctggaccgatttcacgcgttcggtgcgggccggctcc
atggccgggcgccttgctgccacggtggtaagccggcaggagcgccggaccaagaccggc
aacaagatgggcattgtcggcctttccgacccttccgggcagttcgaagcggtgctgttc
tctgaagcgctggcgcagtaccgggagttgcttgagccgggcaaggccgtgctgctgcag
gtgtcggcggaactgcagggcgaggatgtgcgcgcgcgtatccagaccgtggagccgctc
gaccaggcggcctcgaaaatgcagaaggggatgcgcgttttcctgcgctcgcccgagcct
ctggaaagcgtcgccacccggctcggttcgcttggcggcggccgaggggatggcgaggta
tcgctggtgcttctgctcggtgagcgcggcgatacggaggtggaggtgaagctccccggc
cgcttcagcctgtcgccgcagatcgccggcgctctgaaggcggtgcccggtgtcgaaatg
gtcgagatggcgtaa
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