Acetobacter pomorum: CPF11_09875
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Entry
CPF11_09875 CDS
T05180
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
apom
Acetobacter pomorum
Pathway
apom03030
DNA replication
apom03410
Base excision repair
apom03420
Nucleotide excision repair
apom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CPF11_09875
03410 Base excision repair
CPF11_09875
03420 Nucleotide excision repair
CPF11_09875
03440 Homologous recombination
CPF11_09875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apom03032
]
CPF11_09875
03400 DNA repair and recombination proteins [BR:
apom03400
]
CPF11_09875
Enzymes [BR:
apom01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CPF11_09875
DNA replication proteins [BR:
apom03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CPF11_09875
DNA repair and recombination proteins [BR:
apom03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CPF11_09875
NER (nucleotide excision repair)
GGR (global genome repair) factors
CPF11_09875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
HHH_5
DprA_N
HHH_2
HHH
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
ATI12726
LinkDB
All DBs
Position
complement(2085911..2088715)
Genome browser
AA seq
934 aa
AA seq
DB search
MTETPHLVLVDGSGFIFRAFHALPPMTSPEGVPVNAVYGFTTMLARLLKDHVGTHLAVLF
DASRQTFRSEIYPQYKAHRPEPPEDLRPQFSLIREATQAFNVPGIELPGWEADDLIASYA
TAIRAQGGTCTIVSSDKDLMQLVGDGVCMLDPIKQTPVGPAEVETKFGVPPTKVVDVQAL
MGDPTDNVPGVPGIGPKTAAALVQEYGTLEAVLNAAPEMKKSKRRDMLIEHAEAARVSLQ
LVTLATDVPLPVPVDELNTREPDMLMLADWLDRMGFRSILSRMGLGHPSGAHAHRAAKKV
AAASVAGATTPAADTAPTTDASVLSAPYHDYETVRTAEALQKWISTAQEAGICAVDTETD
GLDPLAANIVGFSIATAPGKACYVPLKHEGTLEAPTGEQLAVDAALKLLAPLLQDDAVLK
IFHNAKFDLLILDHAGIPLSSITAVDDTMLISYSQSAGLHGQGMDELSNLHLNHTPITYD
SVTGTGRNRVPFAQVPVETATKYAAEDADVTLRLWYVLHPTLRTNKALALYEQIERPLSV
ILADMEKAGIAVDRTELDRLSKDFEARMQGMENDIYEAAGRQFNIGSPKQLGEILFDEMG
LKGGKRGKAGAWSTDSSVLQDLADQGHDLPARILAWRQLAKLKSTYTDALLRQAGRDDRV
HTSFQMAITSTGRLSSTDPNLQNIPVRTEEGTRIRQAFIAPSGKKLISADYSQIELRLLA
DVANIPALREAFQLGQDIHARTASEVFNIPLEGMDALTRRRAKAINFGIIYGISAFGLGK
QLGIPAGEARTYIDAYFARYPGIRDYMERMREEARTHGYVLTPFGRRCYVPGIHEKSAAR
RQYAERQAINAPLQGGAADIIKRAMVHLPLALQKAGFGATRMLLQVHDELLFETDESDAE
AVAEIIKNVMEAAADLAVPLVVETGIGQNWAEAH
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaacaccccatctggttctggtagatggcagcggctttattttccgcgccttt
catgccctcccgcccatgaccagcccagaaggtgtgcccgtaaatgccgtttatggcttt
accaccatgctggctcgtttgcttaaagaccatgtaggcacccatctggctgtgttattt
gatgccagccgccagacattccgttcagaaatttatccgcagtataaagcacaccggccc
gaaccgcctgaagacctgcgcccccagttcagcctgatcagggaggccacacaggccttc
aatgtgccgggcatcgaactgcccggatgggaagcagacgatcttattgcatcctacgca
acagccattcgggcacagggcggtacctgcaccattgtttcttcagacaaagatctcatg
cagttggtgggggatggcgtttgcatgctggacccaatcaagcaaacacctgttggccct
gcagaagtggaaaccaaatttggggtgccccctacaaaagtagtggatgtgcaggccctg
atgggagaccccacagataacgttcccggtgtgcccggtattggccccaaaacagccgca
gcccttgtgcaggaatatggcacactggaagctgttttgaatgccgcgccggaaatgaaa
aaatccaagcggcgtgatatgctgattgaacacgccgaagccgctcgcgtttctctgcaa
ttggtaacacttgctacagatgttcccctccccgtgccggtggatgagctcaacacgcgt
gagccagacatgctaatgctggcagactggctggatcgcatgggctttcgttccatcctc
agccgtatggggcttgggcatccctctggcgcccacgcacatcgtgcagcaaaaaaagtg
gctgcagcatctgttgccggagccactacgcctgctgctgataccgcgccaaccaccgat
gcttctgtactttctgcgccatatcatgactatgaaaccgtacgcacagcagaagctttg
caaaaatggatcagcacagcgcaggaagccggtatctgtgccgttgatacagaaacagat
gggttagacccgctggcggctaatattgttgggttttctattgcaacggctccgggcaaa
gcctgctatgtgccattaaaacatgaaggcactctggaagctcccacgggtgaacaactt
gctgttgatgcggcccttaaacttctggcaccacttttgcaggatgatgccgttttaaag
atcttccataacgccaagtttgatctgctcattctggatcatgcgggcattccgctttcc
agcatcaccgctgttgatgacactatgctaatctcttacagccagtctgccgggttgcat
gggcaaggtatggatgagctttctaacctgcatttaaaccatacgcccattacgtatgac
agtgtgaccggcacaggccgtaaccgcgtgccttttgcgcaagttcctgttgaaacagct
accaaatatgcggctgaagatgccgatgtaaccttgcgcctctggtatgtgctgcacccc
acgctgcgcaccaacaaggcactggcgctttatgaacagattgaacgcccgctttcagtt
attctggccgatatggaaaaagctggcattgctgtagatcgtacagagcttgaccggctt
tccaaagattttgaagctcgtatgcagggcatggaaaacgatatttacgaagccgccggg
cgacagttcaatatcggctcccccaaacaattgggggaaatcctgtttgacgaaatgggc
ctgaagggtggcaaacgcggcaaggccggagcgtggagcacagattcctctgtattgcag
gatctagccgaccaagggcatgatctgcctgcgcgtattttagcatggagacaacttgcc
aagctgaaatccacttatacggatgcgctcttgcgccaagccgggcgggatgaccgcgtg
catacatctttccaaatggctatcacctccaccgggcgcttatcttcgactgatcccaac
ctgcaaaatattccagtgcgaacggaagaaggcacacgcatccggcaggcctttattgcg
ccatctggcaaaaagctaatttctgctgactattcgcaaatcgaactgcggctactggcc
gatgttgccaatattcctgcattgcgtgaagcttttcagctcgggcaggatattcacgcc
cgcacggcatcggaagtgttcaatatcccgcttgagggtatggatgcccttacgcgacgg
cgcgcgaaagccattaattttggcattatttacggcatttcagcctttgggctaggcaaa
cagcttggcattcctgctggtgaagcacgcacttatatagatgcctattttgcccgttac
cccggcattcgtgattacatggaacgcatgcgggaagaagcacgtacccatggctatgtt
ctcacgccttttggccgccgctgctatgtgccgggcattcatgaaaaaagtgctgccaga
cgccaatatgccgagcgacaagctatcaatgctcccttacaaggtggtgctgcagatatt
ataaaacgcgccatggttcatttgccactggctctacaaaaagcaggctttggcgcaaca
cgcatgctcctgcaggtgcatgatgaactgttatttgaaacagatgaatcagacgctgaa
gctgtggcagaaattattaaaaacgttatggaagcagcagcagatcttgctgttccgctg
gttgtagaaaccggaataggccaaaattgggcggaggcacattaa
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