Acetobacter pasteurianus IFO 3283-22: APA22_17480
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Entry
APA22_17480 CDS
T01815
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
apq
Acetobacter pasteurianus IFO 3283-22
Pathway
apq02024
Quorum sensing
apq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
APA22_17480 (hfq)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APA22_17480 (hfq)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apq03019
]
APA22_17480 (hfq)
03036 Chromosome and associated proteins [BR:
apq03036
]
APA22_17480 (hfq)
Messenger RNA biogenesis [BR:
apq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
APA22_17480 (hfq)
Chromosome and associated proteins [BR:
apq03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
APA22_17480 (hfq)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
DUF5594
Motif
Other DBs
NCBI-ProteinID:
BAI09024
LinkDB
All DBs
Position
complement(1890846..1891130)
Genome browser
AA seq
94 aa
AA seq
DB search
MEKESAYNVQDAFLNQIRRSRAAVTVFLVNGVKLQGFITWFDDEVVLLRRDEQTQLIYKH
AISTVMPSIPVNISDSNTADAQADRDLSLGDEFL
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
gtggaaaaagagagtgcatataacgtgcaggatgcgttcctgaaccagatccggcgctca
cgcgcggctgttactgtgtttctggtgaacggcgttaagttacagggatttattacatgg
tttgatgatgaggttgttcttttacggcgtgatgaacaaacccagcttatctacaagcat
gccatcagcacggtaatgcccagcattcctgtcaatatttccgattccaacactgccgat
gcgcaggcagacagggacctttctcttggcgacgagtttctctga
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