KEGG   Abrus precatorius (Indian licorice): 113853985
Entry
113853985         CDS       T07330                                 
Name
(RefSeq) THO complex subunit 1 isoform X1
  KO
K12878  THO complex subunit 1
Organism
aprc  Abrus precatorius (Indian licorice)
Pathway
aprc03013  Nucleocytoplasmic transport
aprc03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aprc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113853985
  09122 Translation
   03013 Nucleocytoplasmic transport
    113853985
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aprc03019]
    113853985
   03041 Spliceosome [BR:aprc03041]
    113853985
Messenger RNA biogenesis [BR:aprc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     113853985
Spliceosome [BR:aprc03041]
 Complex C
  Other components
   EJC/TREX
    113853985
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    113853985
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 113853985
NCBI-ProteinID: XP_027340548
UniProt: A0A8B8KBJ4
LinkDB
Position
Unknown
AA seq 605 aa
MEVFKRAIIQPGPPESFALQTVQEVIKPQKQTKLAQDENQFLENILRMLLQEFVSAAVQS
GEKIMQFGQSIDSSETTQGHIPRLLDIVLYLCEKEHIEGGMIFQLLEDLTEMSTMKNCKD
IFGYIESKQDILGKQELFARGKLVMLRTCNQLLRRLSKANDVVFCGRILMFLAHFFPLSE
RSALNIKGVFNTSNETKYEKEPLEGICIDFNFYQTFWGLQEYFSNPTSINHAPAKWQKFT
SSLSVVLNTFEAQPLSDEEGDANNLEEEAVNFSIKYLTSSKLMGLELKDPSFRRHALVQC
LILFDYLKAPGKGDKDLPSENMKEDITTCEERVKKLIELTPPKGTQFLHKIEHILEREKN
WVWWKRDGCLPYEKQPLEKKTVPDGSKKRRPRWRLGNKELSQLWKWADQNPNALTDPQRV
QTPSIMEYWKPLAEDMDPSAGIEAEYHHKNNRVYCWKGLRLSARQDLEGFSKFTDHGIEG
VVPLELLPPDVRSKYQAKPSDRGKRSKKEETKGNAHQVEENQIATTATEIDSEGIRTDTT
ATPMEFDGATVPGTQGGTPTPDELQKHSSDTDVGQESGQLEADAEVEAGIIDGETDADVD
LDAVG
NT seq 1818 nt   +upstreamnt  +downstreamnt
atggaggtcttcaaaagggccataatacagcctgggccacctgaaagttttgctttgcag
acggttcaagaagtaataaagcctcaaaaacaaacaaaattggcccaagatgagaaccag
ttcctagaaaatattctacgcatgctgcttcaggagtttgtgtcagcagcagtacagtcc
ggggagaaaataatgcaatttgggcaatcaattgattctagtgaaactacccagggccac
attccacgccttcttgatattgtgctatatctttgtgagaaggaacacattgaaggtggt
atgatttttcaactgctggaagacttgacagaaatgtctacaatgaaaaactgcaaagat
atttttggctatattgagagtaaacaagatatattgggcaagcaagaactctttgctcga
ggaaaacttgtgatgctgaggacctgcaatcagcttcttcgtcgtttatcaaaggcaaat
gatgtggtcttttgtggaagaattctcatgtttctagctcatttctttccattatcggag
cgatcagccttaaatatcaaaggagtttttaacacatccaatgaaacaaaatatgaaaaa
gaacccttggaaggcatatgtattgatttcaatttttatcaaactttttggggtctccag
gaatatttttctaaccctacttccattaatcatgctccagcaaagtggcagaaattcacc
tccagtttgtcggttgtattgaatacatttgaagcacaacctttgagtgatgaagaagga
gatgctaataatttggaggaagaggcagttaattttagtataaaatatcttacaagcagc
aaactgatgggtctagagttaaaggacccaagttttcgacgtcatgctcttgtgcagtgt
cttatattgtttgattacttgaaggcccctggaaaaggtgacaaggatttgccatctgaa
aacatgaaagaagacattacgacatgtgaggaacgagttaaaaaacttattgaactgaca
ccaccaaaagggacgcagtttcttcacaaaattgagcatattttggaacgagaaaagaat
tgggtgtggtggaaacgtgatggctgcctaccttatgaaaaacagcctttggagaagaaa
acagtaccagatgggtccaagaagcgtaggccaagatggagattgggtaataaagaactg
tctcagttgtggaagtgggcggatcaaaatccgaatgctttaactgatcctcaacgtgtt
caaacaccttcaattatggaatactggaaacccttagcggaagatatggatccttctgct
ggaatagaggctgaatatcatcacaagaataacagggtttactgttggaaaggtctccgg
ctatcagcacggcaagacttggagggattttctaagtttactgatcatggaattgaaggg
gttgtcccactagaacttttgccacctgatgtccgatcaaaataccaagcaaaacctagt
gacagggggaaacgtagtaaaaaggaagaaacaaaaggcaatgcccatcaagttgaggaa
aatcagattgctacaactgcaactgagatcgatagtgaaggcattagaacagataccaca
gcaacacctatggaatttgatggtgccactgtccctggtactcaaggtggaaccccaacg
cctgatgaacttcagaagcacagctcagacactgatgttggtcaggaatcaggccaattg
gaagcagatgctgaagttgaggctggaattatagatggagagacagatgcagatgttgat
ttagatgctgttggctga

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