Abrus precatorius (Indian licorice): 113857591
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Entry
113857591 CDS
T07330
Name
(RefSeq) regulator of nonsense transcripts UPF3-like
KO
K14328
regulator of nonsense transcripts 3
Organism
aprc
Abrus precatorius (Indian licorice)
Pathway
aprc03013
Nucleocytoplasmic transport
aprc03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aprc00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113857591
03015 mRNA surveillance pathway
113857591
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aprc03019
]
113857591
Messenger RNA biogenesis [BR:
aprc03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
113857591
mRNA cycle factors
P-body specific factors
113857591
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
RRM_2
Motif
Other DBs
NCBI-GeneID:
113857591
NCBI-ProteinID:
XP_027345446
UniProt:
A0A8B8KNN5
LinkDB
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Position
Unknown
AA seq
540 aa
AA seq
DB search
MERKMKVRSERERTKVVIRHLPPSLTQSDLFQHIDSRFSSRYNWFSFRPGNNSHKRQRHS
RAYIDFKCPQDVFEFAEFFDGHVFVNERGAQHKAIVEYAPSQRVPKPSAKKDGREGTIYK
DPDYLEFLKLIAKPHEHLPSAEIQLERKEAEQAGANKDAPIVTPLMEYVRQKRAVDSGMQ
ASLAVAKISRRARAALPGKPGTGNSKRGSEKKKYVQKDNAKSANRKESKDKSAFIVVPRR
EDQSATSSIKGISEIETLHGIEGPISGIPLTSDSGKKKFLLLKGKQREIPSAADSLVKQQ
NVQSGNTPISAKQNQRREASGRLIRSILLNNEARQSQSTTGTQHKIQILTSENGKRPPRP
FGSRSGLNDQVSGHDAGQVNSEGDSKRSSDDKFVKKDLHGSGNVGDKTEKRTRNKDRPDR
GVWTPLRRSDVSQTGNEHSSSSLTQPTLSNPDSAEVSAGEAKESVSSANRSGEFPASAGG
RVSSSVENGSQRNFTRRGSSYVVKDDGAVSLNEGKPSKKGGVGHSAHEKQVWVQKSSSGS
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atggaaaggaagatgaaggtccgttccgaaagggaaaggacgaaagtggtgattaggcat
ttgcccccttctctcactcaatctgatctcttccaacacatcgattcccgcttctcttct
cgctacaattggttctctttccgtcccggcaacaacagtcacaagcgtcagaggcattcc
cgagcgtatatagacttcaagtgtccccaagatgtattcgagttcgctgagttctttgac
ggacacgttttcgttaacgagagaggtgcacagcataaagcgattgttgagtacgcgcct
tctcagcgtgttcccaagccgagtgccaaaaaggatggacgtgaagggactatatacaaa
gatccagattatcttgagttcctcaaactcattgcgaagccgcacgagcatcttcctagt
gcagaaatacagttggaaagaaaagaagctgagcaagctggggctaacaaggacgcacct
attgtcacacccttgatggaatatgttcgccagaaacgtgctgttgacagtggtatgcag
gcttcattggctgtggcaaaaattagcagaagagcaagagctgctttgccaggcaagcct
ggcacaggcaattctaaacgaggatctgaaaagaagaagtatgttcagaaggacaatgcc
aagagtgccaatcggaaggagtcaaaagacaagtcagcctttattgtggtcccccggcga
gaggatcaatcagctacatcaagtattaaaggaatttcagaaattgaaactttacatggc
attgaaggtcccatttctggaattccactgacttctgactcaggaaagaaaaaattcctt
cttctgaaaggaaaacaacgagaaattcctagtgctgctgatagtttggtaaaacagcaa
aatgtacaatctggaaacactcccatttctgcaaaacagaaccagaggcgtgaagctagt
ggaagattgattaggagcatacttttaaataatgaagctcgtcaaagtcagtctacaact
ggtacacaacataaaattcaaatcttaacttctgagaatgggaagcggccacctcgtccc
tttggctcaaggtccggcttaaatgatcaagtctctggtcatgatgctggtcaagtcaat
tctgaaggggattctaaaaggtcttcggatgacaagtttgtaaaaaaggatctgcatggt
tcaggtaatgtaggtgacaaaacagaaaaacgtactcgaaacaaggatagacctgatcgc
ggtgtttggacccctcttcgtcgttctgatgtttcacaaactggtaatgagcactcatca
tcttcattgactcagcctacgctttcaaatcctgattctgctgaagtttcggcaggagaa
gcaaaagaaagtgtttcttctgcaaacaggagcggggaattccctgcttctgcaggtgga
cgagtcagttcctctgtagaaaatggttctcaaagaaattttactcgccgtggatcttct
tatgtagtgaaggatgatggtgcagtcagtttgaatgaagggaaaccttccaagaaaggt
ggtgttgggcatagtgctcatgagaaacaagtctgggttcagaaatcatcttcaggttct
taa
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