Ahaetulla prasina (Asian vine snake): 131194486
Help
Entry
131194486 CDS
T09329
Symbol
THOC1
Name
(RefSeq) THO complex subunit 1 isoform X1
KO
K12878
THO complex subunit 1
Organism
apri
Ahaetulla prasina (Asian vine snake)
Pathway
apri03013
Nucleocytoplasmic transport
apri03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131194486 (THOC1)
09122 Translation
03013 Nucleocytoplasmic transport
131194486 (THOC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apri03019
]
131194486 (THOC1)
03041 Spliceosome [BR:
apri03041
]
131194486 (THOC1)
Messenger RNA biogenesis [BR:
apri03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131194486 (THOC1)
Spliceosome [BR:
apri03041
]
Complex C
Other components
EJC/TREX
131194486 (THOC1)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131194486 (THOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
efThoc1
Death
bDLD3
Motif
Other DBs
NCBI-GeneID:
131194486
NCBI-ProteinID:
XP_058031519
LinkDB
All DBs
Position
3:complement(58040509..58073049)
Genome browser
AA seq
695 aa
AA seq
DB search
MQSSRSAMNDVNRMRHRWRLSGARMSPPTLFSLPEARLRFMNSTRDALRNKTIKPLLTAF
SQVPGSENEKKLTLDQAFRVALEEEIINKASCENVLAIISLVISGVIEEKSFWQRYKRIL
SHEGICTASTPFVLLGDVLDCLPLDQCDRIFTFVEKNVTTWKSNTFYSAGKNYLLRMCND
LLRRLSKSQNTVFCGRIQLFLARLFPLSEKSGLNLQSQFNLENITVFNTSEQDSTLGQKH
AEEREEGMEVEEGEMGDDEAPTSCSIPIDYNLYRKFWSLQDYFRNPVQCYEKVSWKIFLK
YSEEVLTVFESYKLDDTQASRKKLEELKTGGEHVYFAKFLTSEKLMDLQLSDSNFRRHIL
LQYLILFQYLKGQVKFKSSNFILTDEQSLWIEATTKQVYQLLSENPPDGKRFSKMVEHIL
NTEENWNSWKNEGCPSFVKERQSDSKSVRPFVRKRLAPEDFLGKGPNKKILMGNEELTRL
WNLCPDNMEACKSESREYMPTLEEFFEEAIEQADPENMVDKEFKVVNNSNYGWRALRLLA
RRSPHFFQPTNQQFKSLPEYLENMVIKLAKELPPPSEEIKTGEDEDEEDNDALLKENNES
PEVQRDKLVTGEQIELFANRLGEYWKVLAPYLEMKDSDIRQIESDSEDLKMRAKQLLVTW
QDQEGIHATMENLITALTKAGLNDLSESLSNDSEN
NT seq
2088 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcttctcggagcgccatgaatgacgtcaatagaatgcgtcaccggtggcgtctg
tcaggagcgaggatgtcgccgccaacgctcttcagcttgccggaggcgcggttgcgtttc
atgaattctactcgagatgcactcagaaacaaaaccattaagcctttattgactgcattt
agccaggtacctggaagtgaaaatgaaaaaaagttaacactggatcaagctttccgagtt
gctctggaagaagaaattataaataaagcttcttgtgaaaatgtcctggctatcatttca
cttgttattagtggggtcatagaagagaaatcattctggcagagatataaacggattctc
tcccatgaaggtatttgtactgcatcaaccccttttgtgcttctgggagatgttttggat
tgccttcctttggatcagtgtgacagaattttcacctttgtggaaaaaaacgttaccaca
tggaaatcgaacacattttactctgcgggaaagaattatttactgagaatgtgcaatgat
cttttaagaagactgtcaaaatcacaaaatacagtattttgtggaagaattcagctcttc
ttggccaggttatttcctctttcagaaaagtcagggcttaatttgcaaagtcaatttaat
ttggaaaatatcacagtttttaataccagtgagcaagacagcacccttggacagaagcat
gcggaggaaagagaggaaggaatggaagtggaagaaggtgaaatgggagatgatgaagct
cctacaagttgttccattccaatagattataatttgtacagaaaattttggtcacttcaa
gattacttcagaaatcctgtgcagtgctatgaaaaggtctcatggaaaatatttcttaag
tactcagaagaagtattaactgtctttgagagctacaagttggatgacactcaggcatca
agaaaaaaattagaagagctgaaaactggaggagagcatgtttattttgcaaaatttctt
acaagtgaaaagttaatggatttacagttgagtgacagcaattttcgccgccatatactg
ttgcagtatttaatattatttcagtatttaaaggggcaggtaaagtttaaaagttcaaac
tttattctgactgatgaacagtccctgtggattgaagctaccacaaaacaagtttaccag
cttctatcagaaaacccacctgatggaaaaaggttctccaaaatggtagagcatatatta
aacacagaagaaaattggaattcatggaaaaatgagggctgtccaagctttgtgaaagaa
agacagagtgattccaagtcagtgagaccttttgtgcgaaagaggctagctcctgaagat
ttcttagggaaaggacctaacaaaaaaattctaatgggaaacgaagaattaactcgcctc
tggaatttatgccctgataacatggaagcgtgtaaatctgagagtcgagaatatatgcca
acattggaagagttttttgaagaagctatagaacaggcagatcctgaaaacatggttgat
aaagaatttaaggttgtgaataattctaactatggctggagagcattaagactattagca
agaagaagtcctcacttttttcagccaaccaatcaacagtttaaaagtttaccggaatac
cttgaaaatatggtcatcaaattagctaaagaattacctcctccttctgaagaaattaaa
acaggcgaggatgaagatgaggaagacaacgatgctttgttaaaagaaaacaatgaaagt
ccagaagttcagcgggataagcttgtaacaggagaacaaatagaattatttgctaacaga
cttggtgaatattggaaagtcctggctccatacttggaaatgaaagactctgatataagg
caaattgaatcagatagtgaagatctgaagatgagagctaagcagttgcttgttacctgg
caagatcaagaaggaatccacgctactatggaaaatttgattactgcattgaccaaagct
gggctgaatgacctttctgaaagcttatccaatgacagtgaaaactag
DBGET
integrated database retrieval system
