Ahaetulla prasina (Asian vine snake): 131196249
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Entry
131196249 CDS
T09329
Symbol
DDX1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apri03041
]
131196249 (DDX1)
03016 Transfer RNA biogenesis [BR:
apri03016
]
131196249 (DDX1)
Enzymes [BR:
apri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131196249 (DDX1)
Spliceosome [BR:
apri03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
131196249 (DDX1)
Transfer RNA biogenesis [BR:
apri03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
131196249 (DDX1)
BRITE hierarchy
Motif
Pfam:
DEAD
Helicase_C
SPRY
ResIII
CMS1
SNF2-rel_dom
DUF4882
Motif
Other DBs
NCBI-GeneID:
131196249
NCBI-ProteinID:
XP_058034792
LinkDB
All DBs
Position
1:156767654..156790949
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAQAVEEMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDQQEGKKGKTTIKTGGGVLNKWQMNPYDRGNAFAIGADGLCCQSREIKEWH
GCRSTKGVTKGKYYYEVSCRDQGLCRVGWSSSQASLDLGTDKFGFGYGGTGKKSHNKQFD
SYGEEFTMHDTIGCYIDADKSQISFSKNGKDLGLAFEIPQHLKNQALFPACVLKNAELKF
NFGEEDFKFPPKDGFIAIDKAPEGNVTKSQHTGSAQVAQSKNLPNAPKALIVEPSRELAE
QTLNNVKQFKKYVENPKLRELLIIGGVAAREQLSVLEQGVDIVVGTPGRLDDLVSTGKLA
LSQIRFLVLDEADGLLSQGYSDFINRIHSQIPQITSDGKRLQVIVCSATLHSFDVKKLSE
KIMHFPTWVDLKGEDSVPDTVHHVVVPVNPKTDKLWERLGKNHIRTDEVHAKDNTRPGTN
SAEMWSEAIKILKGEYAIRAIKEHKMDQAIVFCRTKIDCDNMEQYFIQQGGGPDRKGHQF
SCVCLHGDRKPHERKQNLERFKKGEVRFLICTDVAARGIDITGVPYVINVTLPDEKQNYV
HRIGRVGRAERMGLAISLVAAEKEKVWYHSCPSRGKNCYNTRLKDEGGCTIWYNEMQLLG
EIEEHLNCTITQVEPDIKVPVDDFDGKVAYGKRKAAGGGTYKGHVDILAPTVQELATLEK
EAQTSFLHLGYLPNQLFRTF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttttcagaaatgggagttatgccagaaatcgctcaagctgtagaagaaatg
gactggcttctgcctacagatatccaggcggagtccattccattgattttgggaggaggc
gatgtactcatggctgcagaaactgggagtggaaaaactggtgcattcagcatcccagtt
attcaaattgtttatgaaacactaaaagatcaacaggaaggaaaaaagggtaaaactact
attaaaactggtggaggagtgctgaacaaatggcaaatgaatccctatgacagaggaaat
gcatttgctattggagctgatggtctgtgttgccaaagcagagaaataaaagaatggcat
ggatgtcgatcaactaaaggtgtaactaaaggaaaatattattatgaagtatcctgtcgt
gaccagggtttgtgcagagttggatggtcctcttcgcaagcttcattagatttgggtact
gataaatttggctttggctatggtggaaccggaaagaaatctcataacaaacagtttgat
agttatggggaggaattcaccatgcacgacacaataggttgttatatagatgctgataaa
agtcaaatctcattttcaaaaaacggaaaagatcttggacttgcatttgaaattccacag
cacctaaaaaaccaggccctctttccagcttgtgtcctaaagaatgctgaattaaaattc
aattttggtgaagaggactttaagtttccacccaaagatggtttcattgctattgataaa
gctcctgagggtaatgttacgaagtcccagcacacaggaagtgcacaagtagcgcagtcc
aagaatttaccaaacgctcccaaagctttgattgtggagccatccagagagttagcagag
caaactctgaacaatgtgaaacaattcaaaaaatacgttgaaaatcctaaattaagagaa
ctcctgattattggtggtgttgctgcgagagagcagctctccgtattggagcaaggggtg
gacatagttgttggaactccaggaagactggatgatcttgtttcgactggaaaattggct
ttatctcaaatcaggtttctagttcttgatgaggctgatggcctccttagtcaaggttat
tcagatttcatcaaccgtattcattctcaaattccccagataacttctgatgggaaaagg
ctgcaggtcattgtgtgttctgccactctgcattcttttgatgtaaagaagttatctgag
aagattatgcacttccccacttgggtagatttgaaaggcgaggattctgtcccagatact
gtgcaccatgttgttgtacctgtgaaccccaaaactgacaaactctgggagaggcttggt
aaaaatcacatcagaacggatgaggtgcatgcaaaggataatacaagacctggtacaaat
tctgcagaaatgtggtcagaagcaattaagattttaaaaggagaatatgctattcgtgcc
atcaaggaacacaagatggatcaagcaatagtcttctgcagaactaagatagattgtgac
aatatggaacaatactttatacagcaaggaggaggtccagataggaagggacatcaattc
tcatgtgtgtgccttcatggagaccgaaagcctcatgagagaaagcagaatttggagcgc
tttaagaaaggagaggtcagatttttgatctgcacagatgtagcagccagaggaattgat
atcactggtgtgccttacgttatcaatgtcacacttccggatgaaaaacagaattatgtt
catcggattggcagagtgggacgagctgaacgcatgggcctggcaatttccctggtggca
gcagagaaggaaaaagtttggtatcattcatgccccagtcgtgggaagaactgctacaat
actagactgaaggatgaaggtggttgcactatttggtacaatgagatgcagcttttaggt
gaaatagaagagcatctgaattgcaccattactcaggttgagccagatattaaagttcca
gtagatgattttgatggcaaggtcgcctatgggaaaagaaaagctgctggtggtggaaca
tacaaaggccacgtggacattctggcacccacagtgcaagagctggctaccctcgagaag
gaagctcagacgtctttcttgcatcttggttaccttcctaatcagctgtttagaacattt
tga
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