Ahaetulla prasina (Asian vine snake): 131198703
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Entry
131198703 CDS
T09329
Symbol
TRIM56
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM56
KO
K12026
tripartite motif-containing protein 56 [EC:
2.3.2.27
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apri04121
]
131198703 (TRIM56)
Enzymes [BR:
apri01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131198703 (TRIM56)
Ubiquitin system [BR:
apri04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
131198703 (TRIM56)
BRITE hierarchy
Motif
Pfam:
zf-B_box
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_2
PQQ_2
zf-RING_5
Phytase-like
Motif
Other DBs
NCBI-GeneID:
131198703
NCBI-ProteinID:
XP_058039604
LinkDB
All DBs
Position
4:complement(145356..148891)
Genome browser
AA seq
691 aa
AA seq
DB search
MAAKASSLWETLSSSFLTCTICLGHYCQPKILPCLHSYCQDCLKKLLGGSKRELRCPECR
ELVPLPAGIEGLKSNFFINGLLDLVPPVEKSRATCSLCPLIGQDASSVAVSHCIDCADHL
CQACARGHCCSRLTHNHLVVDMEAYRSGKYNEEVRKRQASRCKEHKDEDLQYFCIPCAAA
LCRECRLGPHLEHPSLPLLEAAKARRPIITGLLAGVEEKVQLIIKGKANLEKEIKEMEVW
NMNIRSVVEQTCAKAMEQLLSHKGKVLGQLSGYLEERKEASQVLLSELEFQEQVASTTVA
FAQKVLNLGQEEEIVSLEQMISERLKQLQSFSWETLTMQIPKLCIQPDLLYGCNLFHLEF
HEKATATTPGCNVGNSTKLAKKKAKQKQPQGAEGGQVSRQEKAPNEESSGLVEVGGPPSS
NGPEVPRLIPKPIFFCSFWVKVPTDKKRPQITGLCPLGSNEILVADEQNKKLKRFSLQGE
FKGTIPVPSNVAPFSVAAMGNKVVFTAGSQLYVLNETGGIIWQKALKGGQASHAVTTCDG
NCVVVSVAGHLEVFNMKGHLLEKIVPEGSHERCLVFLGRWKEGFVASDWYRRSVVLLNRN
GDLVTEYQEGQLKESQPGSVCVDAPGIVYVVLRELNKVVAFSEAGEELGSFLTTENNIFK
PRVVTIAGDGHFVVALPNGTVHVFKIKYQGK
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggctgccaaagcatcctccctctgggagaccctttccagcagcttcttgacttgcacc
atttgtctggggcactattgccagcccaaaatcttaccctgcctccacagctactgccag
gactgtctgaagaagctgcttggtgggtcaaagcgggagctgcggtgccctgaatgccgt
gagctggtgcctctcccagccggcattgaaggtttgaagtccaacttcttcatcaatggc
ctcctggacttggtgcctccagtcgagaagtccagggccacctgcagcctgtgcccgctc
attgggcaagatgccagctctgtcgctgtgtctcactgcatcgattgtgctgatcacctg
tgtcaggcctgtgcccgtgggcactgttgctcccggcttacccacaaccaccttgtggta
gacatggaggcttaccgctctgggaagtacaatgaggaagtccggaaacgtcaggcctca
cgctgcaaagagcacaaggatgaagacctgcagtatttctgcattccctgcgctgctgcc
ctctgccgggagtgccgtcttggccctcacctagaacacccatccctgcccttgttggaa
gccgccaaagcccgccgtcccatcatcacaggcctcttggctggggtagaggagaaggtg
cagctcatcatcaagggaaaggccaacctagagaaagagataaaggagatggaggtatgg
aacatgaacatccgtagtgtggtagagcagacgtgtgccaaggccatggaacagttgctc
agccacaagggaaaggtcctgggccaactctctggctacctggaggaacggaaagaggcc
tctcaggtgctgctttctgagctggagttccaggagcaggtggcctccaccacagtggcc
tttgcccagaaggtgctgaatctgggtcaagaggaagagatcgtgtctttggaacagatg
atctcagagaggctgaagcagctgcagagcttctcctgggagaccctcaccatgcagatc
cccaagctctgcatccagccagacctcctctatggctgcaacctgttccacctggagttt
catgagaaggccacagcaaccactccagggtgcaacgtggggaactccaccaaactggct
aagaagaaagcaaagcagaagcagccccagggagcagaaggggggcaggtctccagacag
gaaaaggccccaaatgaagaaagctctggactggtggaagttggtgggcctccttcctcc
aatggaccagaggtcccccgcttgatcccgaagcctatctttttctgcagcttctgggtg
aaagtcccaactgacaagaagaggccacaaatcacgggcttgtgcccacttggctccaac
gaaattctcgtggctgatgagcagaacaagaagttgaagcgcttctctctgcagggcgag
ttcaagggcacgatcccggtgccgagcaacgtggccccattcagcgtggctgccatgggc
aataaggtggtcttcaccgctggatctcagctctatgtcttaaatgaaacaggggggatt
atatggcaaaaggcactcaaggggggccaggccagccacgcagtgaccacctgtgatggg
aactgtgtggtcgtgtctgtggcaggacatctggaggtgttcaacatgaaaggacacctc
ttggagaagattgtgccagagggctcccacgagaggtgcctggtattcctgggcagatgg
aaagagggatttgtggcatctgactggtatcgacgtagtgtggtgctgctcaacaggaat
ggggatctggtgaccgaataccaggaagggcaactgaaggagtctcaaccgggcagtgtc
tgtgttgatgcccctgggatcgtctatgtggtgcttcgcgagctgaacaaggttgtggcc
ttttcggaggctggggaggagctgggatcttttctcacaacagagaacaacatcttcaag
ccacgagtggtcaccattgccggggatggacattttgtggtagccctccccaacggcacc
gtccatgtctttaagatcaagtaccagggcaagtga
DBGET
integrated database retrieval system
