Ahaetulla prasina (Asian vine snake): 131201272
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Entry
131201272 CDS
T09329
Symbol
USP13
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 13 isoform X1
KO
K11836
ubiquitin carboxyl-terminal hydrolase 5/13 [EC:
3.4.19.12
]
Organism
apri
Ahaetulla prasina (Asian vine snake)
Brite
KEGG Orthology (KO) [BR:
apri00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
apri01002
]
131201272 (USP13)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
apri04121
]
131201272 (USP13)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apri04147
]
131201272 (USP13)
Enzymes [BR:
apri01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
131201272 (USP13)
Peptidases and inhibitors [BR:
apri01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
131201272 (USP13)
Ubiquitin system [BR:
apri04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
131201272 (USP13)
Exosome [BR:
apri04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
131201272 (USP13)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP_var
UBA
zf-UBP
UCH_1
UBA_4
Motif
Other DBs
NCBI-GeneID:
131201272
NCBI-ProteinID:
XP_058045063
LinkDB
All DBs
Position
6:100953507..101081041
Genome browser
AA seq
881 aa
AA seq
DB search
MERAALFAQGREAQPMAAGDVGELLVPYMPTIRVPKTGDRVYKTECAFSYDSPDSEGGLY
VCMNTFLGFGREHVERHYRKTGQCVYLHIKRHMREKVTGASGGALPKRRNTKLFLDLESN
SDLNNDDYEYEDEAKLVIFPDHYEIPLPNIEELPALVTIACDAVLSSKSPYRKQDPDSWE
EELQISKHANTLVQMDNGVRIPPSGWKCSKCDLRENLWLNLTDGSVLCGKWFFDGSGGNG
HALEHYKEMGYPLAVKLGTITPDGADVYSFEEEEAVLDPHIAKHLAHFGIDMLQMHVTEN
GLRDNDIKPRVSEWEVIQESGMKLKPMYGPGYTGMKNMGNSCYINSVLQAIFSIPEFQRA
YVGNLPRIFDYSSLDPTQDFNTQMAKLGHGLLSGQYSKPPVKSELIEQVMKEQHKPQRNG
ISPRMFKAFVSKGHPEFSSSRQQDALEFFLHLINLIERNRIGSENPSDVFRFLVEERTQC
CQTRKVRYTERVEYLMQLPVAMEAAINKDELIAYELKRREAETARRPPPEVVRARIPFSA
CLQAFTEPENVEDFWSSALQAKSAGVKTSRFASFPEYLVVQIKKFTFGLDWIPKKLDVSI
DMPNLLDITHLRATGFQPGEEELPDISPPVIIPDDPKGTAYYHEDSYLHTILHHNYIMMN
HFMEPPDFDESSVMQLAEMGFPLEACRKAVYYTGNLGAEVAFNWIIAHMEEPDFAEPLSI
PGYGGTAFPQTGGSGVPGLDNQPPEEMVAIISSMGFQRNVALQALRATNNNLEHALDWIF
SHPEPEEETEVASEVMNIENHVNANILAESDPEGPRIKDGPGRYELFGFISHMGTSTMSG
HYVCHLKKEGRWVIYNDHKVCASEQPPVELGYIYFYHRIPS
NT seq
2646 nt
NT seq
+upstream
nt +downstream
nt
atggagcgggccgccttgttcgcgcaggggcgggaggcgcagccgatggctgccggggac
gtgggtgagctcttggtcccctacatgcccaccatccgggtgcccaagaccggcgatcgc
gtctacaagaccgagtgtgccttctcctacgactcgcccgattccgaaggaggcctttat
gtttgcatgaatactttcctgggatttggaagggaacatgtagaaaggcattatcgcaag
acaggacaatgtgtatatttgcatatcaagcggcatatgagagagaaggtaacaggggca
tctggtggagctttaccaaaaaggagaaacaccaagctatttttagatcttgaatctaac
agcgatttaaataatgatgattatgaatatgaggatgaagctaaacttgtcatatttcca
gaccactacgaaattcctttacccaatatagaagaactgccagcactggtaacaatagct
tgcgatgcagtcctgagttcgaaatctccctaccgaaagcaagacccagactcgtgggaa
gaagagctgcaaatctccaaacatgccaacacgctggtgcaaatggacaatggggtcagg
attccaccaagtggctggaagtgctccaagtgtgacttacgggagaatctttggctaaac
ctcactgatggatcggtactttgcggcaaatggttctttgacggcagtggaggaaacgga
catgcgctcgaacattacaaggagatgggttatccgttagcagtgaagcttggaacgatt
actcctgatggtgcagatgtttattcctttgaggaagaggaggctgttttggatcctcat
atcgccaaacacttagctcattttggaattgacatgctccaaatgcatgtgactgagaat
ggcctgagagataatgacataaaaccccgagtgtctgaatgggaagtcatccaagaatcg
ggcatgaagctgaaaccaatgtatggacctggatataccggcatgaaaaacatggggaac
agctgctacatcaacagcgtattgcaagccattttcagtattcctgaatttcagagggcg
tacgtgggaaaccttccaaggatatttgactactcttctttggacccaacacaagatttc
aatactcaaatggctaaattgggacatgggcttctttcaggccaatattcaaaacctcca
gtgaaatctgagctcattgaacaggtgatgaaggaacaacacaagcctcagcgcaatggt
atttctccacgcatgttcaaagcttttgtaagcaaagggcaccctgaattttcctccagc
cggcaacaagatgcactagaatttttcctgcaccttatcaacctgatagagagaaaccga
attggctcggaaaaccccagcgacgtcttccggttcttggttgaagaacggacccagtgc
tgccaaaccagaaaagtacggtacacagagcgggtggaatatctcatgcaattgcctgta
gcaatggaagctgcaataaacaaagatgaattgattgcttatgaactgaagaggcgagaa
gcagaaacagcgaggaggcccccaccagaggtggtccgggcaaggatccctttcagtgct
tgtctccaggcctttacggaaccagaaaatgtagaagacttctggagcagtgcccttcaa
gccaagtctgctggtgtcaaaacatctcgctttgcttccttccctgaatacctggtggtt
cagataaagaagtttacttttggccttgactggatccctaagaagcttgatgtttctata
gacatgccaaatcttctagacatcactcacctgcgagcaacgggctttcagccaggcgag
gaggaacttccagacatctctccgcctgtgatcattcctgatgaccccaaaggtactgcc
tactaccatgaggattcctacctccacaccattctccaccacaactatatcatgatgaac
catttcatggagcccccagattttgatgaatcctccgtgatgcagctggcagagatgggg
tttccattggaagcatgccggaaagctgtgtactacactggcaacttgggtgctgaggtg
gctttcaactggatcattgcgcacatggaagaaccagattttgcagagcctttatccatc
cctggttatgggggaacagcttttccccaaacaggaggatcaggagttcctgggttggat
aatcagcctccagaagagatggtagccataatttcctctatgggatttcagcggaatgta
gctcttcaggcactacgggcaacaaataacaacttggagcacgcattggactggatcttt
agtcaccctgaaccagaggaggagactgaagtagcttctgaggtcatgaatatagaaaac
catgtgaatgctaacatccttgcagaatcggatcccgaagggccccggatcaaagatggg
ccaggaagatatgaactctttggcttcatcagtcacatgggaacatctaccatgagcggc
cattatgtttgtcatcttaaaaaggaaggaagatgggttatctacaacgaccataaagtt
tgtgcctccgagcagccgcctgtagagctaggctatatttacttctatcacaggatacca
agttag
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