Auxenochlorella protothecoides: F751_0936
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Entry
F751_0936 CDS
T04132
Name
(RefSeq) Histone deacetylase 1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03082
ATP-dependent chromatin remodeling
apro03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
F751_0936
03083 Polycomb repressive complex
F751_0936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apro03036
]
F751_0936
Enzymes [BR:
apro01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
F751_0936
Chromosome and associated proteins [BR:
apro03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
F751_0936
HDAC complexes
Sin3A-HDAC complex
F751_0936
BRAF-HDAC complex
F751_0936
REST complex
F751_0936
SHIP complex
F751_0936
MiDAC complex
F751_0936
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
F751_0936
Heterochromatin formation proteins
Other heterochromatin formation proteins
F751_0936
Chromatin remodeling factors
NuRD complex
F751_0936
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
23612327
NCBI-ProteinID:
XP_011396598
UniProt:
A0A087SDB8
LinkDB
All DBs
Position
Unknown
AA seq
418 aa
AA seq
DB search
MSGKRKVSYFYDPDIGQFYYGQGHPMKPHRVAMAHSLVLQYGLHTQMEMFRPRRAEAEDM
HQFHTEDYVSFLRTVTPDNVGAHQAALREYNMYEDCPVFSGLWEYCRISAGGSIAAAAQL
NAGASDIAINWAGGLHHAKKFEASGFCYVNDIVLAILELLKYHSRVLYVDIDVHHGDGVE
EAFLTTDRVMTLSFHKFGDGFFPGTGDVVNVGHGQGKYYALNVPLRDGITDETYQALFRP
ILAKVMEVYRPEAVVLQCGSDSLAGDRLGVFNLSSAGHAACVEYVRSLGVPLLLLGGGGY
KIVNVSRCWAKETGVALGLDLPEALPPTEYYEYYAPAYQLTVPAKSEGFPNKNTPEHLQA
LQEQATRGSSRSDGDGNWMMDGGLQGEHSWRDEALAHARPQMGMRPAPHAADVDVDAS
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgagcggcaagcgaaaggtgtcgtatttctacgaccccgacatcggacagttttactac
ggccaggggcacccgatgaagccccaccgcgtggccatggcgcacagcctggtgctccag
tacggccttcacacccagatggagatgttccggccccgtcgcgcagaggcggaggacatg
caccagttccacaccgaggactacgtgtccttcctgcgcaccgtcacccccgacaacgtg
ggcgcgcaccaggccgcactccgcgagtacaacatgtacgaggactgccccgtcttctcc
gggctgtgggagtactgccgcatctccgccggcgggtccatcgccgccgccgcacagctc
aacgccggcgcctccgacatcgccatcaactgggccggcggcctgcaccacgccaagaag
ttcgaggcctccggcttctgctacgtcaacgacatcgtcctcgccatcctggagctgctc
aagtaccactcgagggtgttgtacgtggacatcgatgtgcaccacggcgacggcgtggag
gaggccttcctgaccacggaccgcgtgatgaccctgtccttccacaagtttggggacggc
ttcttcccaggcaccggcgacgtggtgaacgtggggcatggccagggcaagtactacgcg
ttgaacgtgccgctgcgggacggcatcaccgacgagacctaccaggccctgttccggccc
atcctggccaaggtcatggaggtgtaccgcccggaggccgtggtactgcagtgtggctcg
gactccctggccggcgatcggctgggcgtgttcaatctttcttcagcaggccacgcggcc
tgcgtggagtatgtgcgttccctgggggtccccctgctcctcctcggcggcggcggctac
aagatcgtcaatgtctcgcgctgctgggccaaggagacgggtgtggccctgggcctggac
ctgccggaggccctgccccccaccgagtactacgagtactacgcgccagcctaccaactg
actgtccctgccaagagcgaggggttccctaacaaaaacacgcccgagcatctgcaggcg
ctgcaggaacaggccacccgagggtcttcccggagcgacggcgacggcaactggatgatg
gatggagggctgcagggggagcacagctggagggacgaggcactggcgcatgcacggccc
cagatgggcatgcggcccgctccccacgccgcggatgtcgacgtggacgcgagctga
DBGET
integrated database retrieval system