KEGG   Auxenochlorella protothecoides: F751_0936
Entry
F751_0936         CDS       T04132                                 
Name
(RefSeq) Histone deacetylase 1
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
apro  Auxenochlorella protothecoides
Pathway
apro03082  ATP-dependent chromatin remodeling
apro03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:apro00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    F751_0936
   03083 Polycomb repressive complex
    F751_0936
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:apro03036]
    F751_0936
Enzymes [BR:apro01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     F751_0936
Chromosome and associated proteins [BR:apro03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     F751_0936
   HDAC complexes
    Sin3A-HDAC complex
     F751_0936
    BRAF-HDAC complex
     F751_0936
    REST complex
     F751_0936
    SHIP complex
     F751_0936
    MiDAC complex
     F751_0936
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     F751_0936
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    F751_0936
  Chromatin remodeling factors
   NuRD complex
    F751_0936
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 23612327
NCBI-ProteinID: XP_011396598
UniProt: A0A087SDB8
LinkDB
Position
Unknown
AA seq 418 aa
MSGKRKVSYFYDPDIGQFYYGQGHPMKPHRVAMAHSLVLQYGLHTQMEMFRPRRAEAEDM
HQFHTEDYVSFLRTVTPDNVGAHQAALREYNMYEDCPVFSGLWEYCRISAGGSIAAAAQL
NAGASDIAINWAGGLHHAKKFEASGFCYVNDIVLAILELLKYHSRVLYVDIDVHHGDGVE
EAFLTTDRVMTLSFHKFGDGFFPGTGDVVNVGHGQGKYYALNVPLRDGITDETYQALFRP
ILAKVMEVYRPEAVVLQCGSDSLAGDRLGVFNLSSAGHAACVEYVRSLGVPLLLLGGGGY
KIVNVSRCWAKETGVALGLDLPEALPPTEYYEYYAPAYQLTVPAKSEGFPNKNTPEHLQA
LQEQATRGSSRSDGDGNWMMDGGLQGEHSWRDEALAHARPQMGMRPAPHAADVDVDAS
NT seq 1257 nt   +upstreamnt  +downstreamnt
atgagcggcaagcgaaaggtgtcgtatttctacgaccccgacatcggacagttttactac
ggccaggggcacccgatgaagccccaccgcgtggccatggcgcacagcctggtgctccag
tacggccttcacacccagatggagatgttccggccccgtcgcgcagaggcggaggacatg
caccagttccacaccgaggactacgtgtccttcctgcgcaccgtcacccccgacaacgtg
ggcgcgcaccaggccgcactccgcgagtacaacatgtacgaggactgccccgtcttctcc
gggctgtgggagtactgccgcatctccgccggcgggtccatcgccgccgccgcacagctc
aacgccggcgcctccgacatcgccatcaactgggccggcggcctgcaccacgccaagaag
ttcgaggcctccggcttctgctacgtcaacgacatcgtcctcgccatcctggagctgctc
aagtaccactcgagggtgttgtacgtggacatcgatgtgcaccacggcgacggcgtggag
gaggccttcctgaccacggaccgcgtgatgaccctgtccttccacaagtttggggacggc
ttcttcccaggcaccggcgacgtggtgaacgtggggcatggccagggcaagtactacgcg
ttgaacgtgccgctgcgggacggcatcaccgacgagacctaccaggccctgttccggccc
atcctggccaaggtcatggaggtgtaccgcccggaggccgtggtactgcagtgtggctcg
gactccctggccggcgatcggctgggcgtgttcaatctttcttcagcaggccacgcggcc
tgcgtggagtatgtgcgttccctgggggtccccctgctcctcctcggcggcggcggctac
aagatcgtcaatgtctcgcgctgctgggccaaggagacgggtgtggccctgggcctggac
ctgccggaggccctgccccccaccgagtactacgagtactacgcgccagcctaccaactg
actgtccctgccaagagcgaggggttccctaacaaaaacacgcccgagcatctgcaggcg
ctgcaggaacaggccacccgagggtcttcccggagcgacggcgacggcaactggatgatg
gatggagggctgcagggggagcacagctggagggacgaggcactggcgcatgcacggccc
cagatgggcatgcggcccgctccccacgccgcggatgtcgacgtggacgcgagctga

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