Auxenochlorella protothecoides: F751_2744
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Entry
F751_2744 CDS
T04132
Name
(RefSeq) Tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
F751_2744
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apro03019
]
F751_2744
Messenger RNA biogenesis [BR:
apro03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
F751_2744
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_19
TPR_17
TPR_2
TPR_8
TPR_1
TPR_12
TPR_11
TPR_16
TPR_14
TPR_9
TPR_7
TPR_10
Motif
Other DBs
NCBI-GeneID:
23614135
NCBI-ProteinID:
XP_011400740
UniProt:
A0A087SPU9
LinkDB
All DBs
Position
Unknown
AA seq
1385 aa
AA seq
DB search
MRTGHVNPARARSPYEVITRRSVGDGSLAVPQATRRDLERLLADALRDPARLTCATAWKA
LAELQYENRGYEAAADTALRGLHWLQARREAGHEALTQVALALRLAMAKSLRRLGRLDEA
ERHFSVLAGWVTEGETAFAEMSGATPVSIHQQALRGMALVALARGDEHAAKAQYERILGK
AAMGRGPGEHWAHADYGWLLYKDGDLQGARQHLEDAVRVALGPESYVTDSQLGEHYQRLG
EVYWAMRGRYRREKQFAYHQFLEAAKAEGHSQAPALAGLGRYFLEVEHSPEQASRCFKRA
LALDPTLELPGEGLCRVLRGEGRRETVRTLCAGIAQRAPSATWAHRKLGALDVESGAFDA
AVPHLQAAIRGDPRNAAAWEALGAAYEGQGRPSAARRAFDRALGIDPGRVPALTRAAGLA
AALGDLAAGLAQYRAAMGLAPQYPPALLGLGRALLAAAGQSLGDALPGRVAAELAEAADL
ARRCVDARPGLRAGWKLLGDALLALGRVAAGEPGADAAGGGAALPEAVRLAVEAAPEALR
PAFRGRSSALRALGGARRAYAELVRLEGAQVPPDPGEAESESARPPPSTDVATATLAEAL
AVEELARAVAPGDAVALRSHASSLLQEAREQVRGALALSPACSRLWALCAATCREDTEKA
EYALARSLQLDPRNAPAWTQLARLYVGAGRPGAADACLQAARTHAAASPGVWEAMGDAEG
WPAAALGLLEHAVGLGAGATHQLRFAALSLGAPAGPDASRAYLAALKASRLLPLDPAAHA
ALGMALQRRGDAAGAAEAYGTAAQLARRRGDLDLEAAVLVRRAAALVEAGDGSTALRIFA
ELDTAGRGGDLALPSVQRTLARAHEQSGDLDTAHAALSSALEGARSGGEAFGVLEDLVSL
AWLAGLSPSGRLEGVLLPRAQVGPWPVGEGEVRALRLRAAELEARAGDVEAVRGVAHRLG
PLDAEAAAHLCLLQAAATQTAGSGLPAAPDDLAATLSAAARRCAAALHLCPRSAPAQVAL
AATSLRADPARARAALGMLCAVLDAGATPIRLRHPALEAATSALLALPPGSSRRAAREHL
ARLARAVHAAPDAAPLWVAGAAVAAHAAAGQEDAEALAALGRADAALLSGREAVRVAAGS
VHAGDALCVLGRVLWAGGRADQAAAAFMRAQAPGNPISAAAAGLHLAALSPLHPDGDRPG
AEALLRDTLKQSDSAILRLTLAGLLRDQGRNDEALEIAAEMTACSAGRHDRTSVTHAARL
LEGSVHLASALQAGVEPVARRAAAGAALGALQRRMAISPTALQLAIGTAAESCLGQKKSG
ARAAEGASKAQRTAVLESGQPLSTDLLLFLSRALRRPSLCARAVHARPWEGQAWAALTPN
VIPAA
NT seq
4158 nt
NT seq
+upstream
nt +downstream
nt
atgaggacaggccacgtgaaccccgcacgagcgaggtcaccgtacgaagttattacgcgc
cgctccgtgggcgacggcagcctggcggtgccgcaggccacgcgccgcgacctggagcgg
ctgctcgccgacgccctgcgcgacccggcgcgcctgacctgcgccacggcctggaaggcg
ctggccgagctgcagtacgagaaccgtgggtacgaggccgcggccgacaccgcgctgcgc
ggcttgcactggctccaggcgcggcgcgaggcggggcacgaggcgctgacgcaggtggcg
ctggccctgcgcctggccatggccaagtcgctgcgccgcctggggcgcctggacgaggcg
gagcgccacttctcggtgctggcggggtgggtgaccgagggcgagaccgcctttgcggag
atgagcggcgccacgccggtcagcatccaccagcaggcgctgcgcgggatggcgctggtc
gcgctggcgcgcggcgacgagcacgccgcgaaggcccagtacgagcgcatcctgggcaag
gcggccatgggccgggggccgggcgagcactgggcccacgccgactacggctggctgttg
tacaaggacggcgacctgcagggcgcgcgccagcacctggaggacgcggtgcgcgtggcg
ctgggccccgagtcctacgtcaccgacagccagctgggcgagcactaccagcggctggga
gaggtgtactgggccatgcgggggcggtaccgccgggagaagcagtttgcctaccaccag
ttcctggaggcggccaaggcggagggtcactcgcaggcccccgcgctggcagggctgggc
cgctacttcctggaggtagagcactcgccggagcaggcgtcgcgctgcttcaagcgcgcg
ctggccctggaccccaccctggagttaccaggggagggcttgtgccgggtgcttcggggg
gagggcaggcgcgagaccgtacgcacgctgtgcgctgggatagcccagcgtgcgcccagc
gccacgtgggcccacaggaagctcggtgccctggacgtcgagagcggcgcctttgacgcg
gcggtgccgcacctgcaggccgccattcggggcgacccacgcaacgcggcggcctgggag
gccctgggcgccgcctacgagggccagggcaggcccagcgccgcgcggcgggccttcgac
cgcgcgctggggatcgacccgggcagggtcccggcgctgacgcgcgccgccgggctggcg
gcggcgctgggcgacctggctgccgggctggcgcagtaccgcgcggccatgggcctggcg
ccgcagtacccgccggccctgctgggcctgggccgggccctgctcgcggcggccggccag
tccctgggcgatgccctgccggggcgtgtggcggccgagctggcggaggccgccgacctg
gcgcggcgctgcgtggacgccaggcccggcctgagagccgggtggaagctgctgggcgac
gcgctgctggcgctggggcgcgtggcggccggcgagcctggcgcggacgctgcgggtggc
ggtgcggcgctccccgaagcggtccgcctcgccgtggaggccgcgcccgaggcgctgcgc
cccgccttccggggtcgatcgagcgcgctgcgcgcgctgggtggtgcgcggcgggcctac
gctgagctcgtgagactggaaggcgcgcaggttccaccggaccctggggaggccgagtcg
gagtccgctcggcctccgccgtcgacggacgtggcgaccgcgaccctggcagaggcgctg
gccgtggaggagctggcgcgggcagtggcgcccggggacgcggtggcgctgcgctcccac
gcctcctcgctcctccaggaggcacgggagcaagtgcgcggggccctggccctgagcccg
gcctgctcccggctctgggccctgtgtgcagccacctgccgcgaggacactgagaaggca
gagtatgccctggcgcgctcgctccagctggaccccaggaatgcaccggcctggacgcag
ctggcgaggctgtacgtgggggcgggccggccgggcgcggccgacgcctgcctgcaggcg
gcacgcacgcacgccgccgcttccccgggcgtctgggaggcgatgggcgacgcggagggg
tggccggccgccgcgctgggcctgctggagcacgccgtcggcctgggggcgggggcgacg
caccagctgcgctttgccgcgctttccttgggcgcgccggccgggcccgacgcctcgcgg
gcgtacctggccgcgctcaaggcctcgcgcctgctgccgctggaccccgctgcgcacgct
gcgcttggcatggccctgcagcgtcgcggcgacgcggctggagccgcagaggcgtatggg
actgccgcccagctggcgcgtcgcaggggggatctcgacctggaggcggctgtgttggtg
cgccgggcggcggcgctggtggaagcgggggacggctcgaccgcgctgcgcattttcgcc
gagctcgacacggcaggcaggggtggcgacctggcccttccaagcgtacagcgaacgctg
gcccgtgcccatgagcagtcgggcgacctggacacggcgcacgccgcgctttcctctgcg
cttgagggggcgcgcagcggaggagaggcctttggcgtgctggaggacctcgtgtcgctg
gcgtggttggcagggctgtcccccagcggtcggctggaaggggtcctgctgccgcgagcg
caggtcggaccctggccggtgggggagggtgaagtccgtgcgctgcgcctgcgtgccgcc
gaactggaggcgcgggcgggcgatgtcgaggcggtgcggggcgtggcgcaccgcctcggg
cccctggacgccgaggccgcggcgcacctctgcctcctgcaggctgcggcgacgcagact
gctggttctgggctcccagcggcgccagatgatctcgccgccaccctcagcgctgcggca
aggcgttgcgccgcagcactccacctctgcccccgctccgccccggcccaggtggcgctg
gcggcaaccagcctgcgcgccgacccggccagggcgcgcgccgcgctgggcatgctgtgc
gccgtgctggacgccggcgcgaccccgatccggctgcgccaccctgcgctcgaggccgca
acgtcggcgctgctggcgctgcccccgggctccagccggcgtgcggcgagggagcacctg
gcgcggctggcgcgggcggtgcatgcggcgcccgacgccgcgccgctctgggtggctggt
gctgccgtcgccgcgcatgctgctgcggggcaagaagacgccgaggcgctggctgccctg
ggccgcgccgacgccgccctgctgtctggaagggaggccgtgcgcgtggcggcggggagt
gtacatgctggcgacgcgctgtgcgttctcggccgcgtgctgtgggcaggtggccgcgcc
gaccaggcggcggcggctttcatgagagcacaggcgccgggcaatcccatttccgctgcc
gccgccggcctgcacctggccgcgctttctcctctccaccccgacggcgaccgtcccggc
gcagaggccctcctacgagacaccctgaagcaaagcgactcagctatacttcgtctgacc
ctggccggcctgctgcgggaccagggccgaaatgacgaggcgctggagatcgccgctgag
atgacggcctgctccgctggccgtcacgaccgtacgagcgtgacccacgccgctcgcctg
ctggagggcagcgtgcacctcgcgagcgcgctgcaggcgggcgtggagccggtggcgcgc
agggccgcggctggcgcggcgctgggcgcgctgcagcgcagaatggccatcagccctact
gcgctgcagctcgccatcggcacagcagcagagagctgcctgggccagaagaagtcgggc
gcgcgtgcggcggagggtgcctcaaaggcgcagaggacggccgtgttggagtctggtcag
cctctctccaccgacctcctcctcttcctgagcagggccctgcgccggccaagcctctgc
gcccgagcggtgcatgcccggccctgggagggtcaggcctgggctgctctcaccccaaat
gtcatccctgctgcctga
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