Auxenochlorella protothecoides: F751_4895
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Entry
F751_4895 CDS
T04132
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 42
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
apro
Auxenochlorella protothecoides
Pathway
apro03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
F751_4895
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
apro03041
]
F751_4895
Enzymes [BR:
apro01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
F751_4895
Spliceosome [BR:
apro03041
]
Complex A
U2 snRNP components
U2 related factors
F751_4895
Complex B
F751_4895
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
23616286
NCBI-ProteinID:
XP_011399298
UniProt:
A0A087SKZ8
LinkDB
All DBs
Position
Unknown
AA seq
477 aa
AA seq
DB search
MAPTRELVSQITREVRRFGKPLGVRATAVYGGSGVANQISELKRGSEAVVCTPGRMIDIL
VTSGGKITNLRRVTYLVLDEADRMFDMGFEPQIARIVNNIRPDRQTVMFSATFPRQVEGL
ARALLADPVEIQVGGRSVVNADIAQFVELRAEEDRLWRLLELLGEWYERGKLLVFVASQE
RCDNLFRDLLRHGYPCLSLHGGKDQSDRESTISDFKSDVCNILIATSVAARGLDVKDLVL
VVNYDVPNHLEDYVHRVGRTGRAGRAGTAVTFIAPEEEQHAPDVVRALRESGAAVPADLA
ALAESFEAKRRAGTAKLHGSGFGGSGFKFSSAEDNLVKALRRATAKEYGIVEGDEEEEAA
AAEGGDGIREVVKKELDMQSTTELEINDFPQRARWKVTHRDTINDMGELGAAVVIKGTFY
PPGAKVAEGDRKIYLHIEGPTEQIVRRAKGEIKRIIEEETERAMRREAPAAGRYSVM
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccacgcgggagctggtgtcccagatcacgcgcgaggtgcggcgcttcggcaag
cccctgggcgtgcgcgccacggcggtgtacggcggttccggcgtggccaaccagatctcg
gagctgaagcgtgggtccgaggccgtggtgtgcacgcccgggcgcatgatcgacatcctg
gtgaccagcggcggcaagatcacaaacctgcgccgcgtgacctacctggtgctggacgag
gcggaccgcatgttcgacatggggtttgaaccccagatcgcgcgcatcgtgaacaacatc
cgccccgaccgccagaccgtcatgttctcggccaccttcccacgccaggtggagggcctg
gcccgcgcgctgctggccgaccccgtggagatccaggtgggggggcggtcggtggtcaac
gccgacatcgcgcagttcgtggagctgcgggccgaggaggaccgcctctggcgcctgctg
gagctgctgggcgagtggtacgagcgcggcaagctcctcgtcttcgtcgccagccaggag
cggtgcgacaacctcttccgcgacctcctgcgccacggctacccctgcctctccctgcac
ggcggcaaggaccagagcgaccgcgagagcaccatctccgacttcaagtctgacgtctgc
aacatcctcatcgccacctcggtggcggcgcggggcctggacgtgaaggacctggtgctg
gtggtcaactacgatgtgcccaaccacctggaggactacgtgcaccgcgtggggcgcacg
gggcgcgcagggcgcgcgggcaccgccgtcaccttcatcgcgcctgaggaggagcagcac
gcgccggacgtggtgcgtgcgctgcgcgagtcgggggcagcggtgcccgccgacctcgcc
gccctggccgagtccttcgaggccaagcgcagggcgggcaccgccaagctgcacggctcc
gggttcggcgggtcgggctttaagttctcctctgccgaggacaacctggtcaaggccctg
cgcagggccaccgccaaggagtacggcatcgtggagggcgacgaggaggaggaagcggcg
gccgccgagggcggggacggcatccgggaggtggtcaagaaggagctggacatgcagagc
acgacggagctggagatcaacgacttcccccagcgcgcgcggtggaaggtcacgcaccgc
gacaccatcaacgacatgggggagctgggcgcggcggtggtcatcaagggcaccttctac
ccgcccggcgccaaggtggccgagggcgaccgcaagatttacctccacatcgagggaccg
acggagcagatcgtgcggcgcgccaagggcgagatcaagcgcatcatcgaggaggagacg
gagcgggcgatgcggcgcgaggccccggcggcggggaggtactccgtcatgtag
DBGET
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