Auxenochlorella protothecoides: F751_5138
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Entry
F751_5138 CDS
T04132
Name
(RefSeq) Endoribonuclease Dicer-like protein 1
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
apro
Auxenochlorella protothecoides
Brite
KEGG Orthology (KO) [BR:
apro00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
apro03036
]
F751_5138
Chromosome and associated proteins [BR:
apro03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
F751_5138
microRNA pathway
RISC loading complex
F751_5138
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
Dicer_dimer
DEAD
ResIII
Helicase_C
PAZ
SWI2_SNF2
Motif
Other DBs
NCBI-GeneID:
23616529
NCBI-ProteinID:
XP_011397183
UniProt:
A0A087SEZ2
LinkDB
All DBs
Position
Unknown
AA seq
1588 aa
AA seq
DB search
MPPHRAERSAFTVAVQAGAAQIKPRAYQVELLEMAKTNNVIAFLDTGAGKTFIAVMLLQH
RLTASLSTHQATARAVFLVPRVPLVFQQAEVLAAHLPCAVGRYVGEMGVDLWDSRRWGRE
WERHGVLVMTPQILLNLLTHAIIPISRVHTIVFDECHHTQKKHPYNLIMKEFYHRVTGST
PRPHILGLTAAPANVRREQASWRLSKNIVTLEGNLDAHVVTVLDREDVEAAAPPPTLRIC
YYSCGQGHPPELRALLRAISHARLRLAAAGDLVSQVWTHELEQKMGSAKKSSGRVYFDPV
ISGFSTSRFNQMLSGVQHVTETLGMWCGAQAARSIFKTLITEVAPTYMAGMGANKKGEGF
EYQTFNPSAARLAAMMGRDTVVMGETMADEEGSNSDMSDEEVPTFPRQEIEQEQTATNLS
ALEVVVAFAQALLPTGAPQAAKCEDMICMLRRRVEGGQLIKDLPVKTMEELLGAVTPYEL
QAEVDALGVVEEAAGPPASAVPGADLRVTAVLAGGAAHVVPMTQEPRRLGLVTQKVVVLV
EQLLQYRGTATQNETDGSCWSGIVFVTRRLACWAVHMLLSTLPCTRAFLRTAAVTGYQQR
TGEAVGVRHQEETLRGFRQGTLNLLVATAVVEEGIDVRRCQLVVRFDLPPTAQSYIQSRG
RARMQNSVLILMVQTELPEELEMINHMIKFEADLRQEVLSNIHKMKARRRDGDEELRYMV
ASTGARVSAGNVLRLLHTYISKLPTDRQAYSILRPTYRTEALLDGMYLTHAFLPSNCPLR
ETVGMPQSTRRKSIASAALNAIRLLHESGSLNDNLLPAAFELAAERRHASGVQSGGFHPP
APSGEHGEVLLHPYRWLVVDDRSRTLAASSSGPAKAMRDLVCLLLEPLPEGLPPCRLPGN
DGASNQLAFLPGPAVRVSGDQLRQLKACHVALAQLMLARGPPRHAAGQRRKAEVAVAVAA
EAADGEGGMVPEPDEIVAGATGGTAPAPPHADIGRAGVAHEAAPTPHDDRPEDKGAGLFV
RALVRRIIDRVIILQDGHLPKSRRGKASRAAGVSPEALSFLLAPAAPSGDGSIDWRLVAE
VCGDAGSTSVLALLRRGVDLRDRIIWTTYNRKVHAFRGVRHDLNLQSTFKTSEDRGSAPR
GKRRAAGAAPAAVSAAGSPADEAPPTTTRTSYAAYYAERWGLPNLDPGQPLIEASAWKQG
AGGRLDAAAEPEEGEASVALVPELTLRRPSLALLRTALTLRSAGEGSDYETLETLGDTFM
KYAVCAELFFENRTYHEGQLTRCKDDVVSNLSLAQRAQALGLHSALQVLPFSVGNWTAPP
IVKVGGKVLADGMEALVGAFVVGSGEEATRVFMRVLGLLKALQPSSKLEPAPGGDADVAH
QEVDVDAIQRVLGYTFARPGLVCEALTHCSWSGRNGSCYQRLEFLGDALLDLVVVQHCFD
SFTDVEPSDLHDMRSVAVNAERLAFVAVHHGLQRHIRHASPKLLSHLTDFVSMWRDEETL
QTFSGALPEYKLVAWVQERAHVQVSCMDVLLGESKGGRNARSSGRLAAQDALDRWRELEP
KLREALVLRAAAKKDGLASMKTPKLVRA
NT seq
4767 nt
NT seq
+upstream
nt +downstream
nt
atgccgccccaccgtgcagaacggtcggcattcaccgtggctgtacaagctggcgctgcc
cagatcaagccgcgggcgtaccaggtggagctcctggaaatggccaagaccaataatgtc
atcgccttcctggacacgggggcggggaagaccttcatcgcggtcatgctcctccagcac
cgcctcactgcctccctcagcacacaccaggcgactgcccgggcggtgttcctggtcccc
cgcgtacctctggtcttccagcaagccgaggtcctggcggcgcacctgccctgcgccgtg
gggcgctacgtgggggagatgggggtggacctgtgggactccaggcgctggggccgggag
tgggagcggcatggggtgctggtcatgacgccccagatcctgctcaacctactgactcac
gccatcatcccgatatcgcgcgtgcacaccatcgtgtttgacgagtgccaccacacccag
aagaaacacccctacaacctcatcatgaaggagttctatcaccgagtgacggggtcgacg
ccccggcctcacatcctggggctcacagccgcccccgccaacgtgaggagggaacaggcc
tcctggcggctgtccaaaaacatcgtgacgcttgaaggaaacctggatgcgcatgtggtc
acagtcctcgatcgcgaggacgtggaggccgccgccccaccacccactctgcgcatatgt
tactactcgtgcggccagggccacccaccagagctgcgagccctcctgcgggccatcagc
cacgccaggctgcgccttgccgccgccggagacctggtcagccaagtctggacgcacgag
ctcgaacagaagatgggcagtgccaagaagtcgtcaggccgagtgtactttgaccctgtg
atctctggattttcaacctccaggttcaaccagatgctgtctggcgtgcagcatgtcacc
gagacactgggtatgtggtgtggggcccaggcagcgcgctccatcttcaaaaccctgatc
accgaggtggcccccacctacatggctggcatgggggccaacaagaagggagagggcttt
gagtaccagaccttcaacccctctgcagcccggctggcggcaatgatgggtcgcgacacc
gtcgtcatgggtgaaaccatggctgacgaggaggggtccaactccgacatgtctgatgaa
gaggtgcccaccttccccagacaagagatcgagcaggagcagacagccaccaatctctct
gccctggaggtggtggttgcctttgcacaagccctgctcccaactggcgcgccccaggcc
gcaaagtgcgaggacatgatttgcatgctcaggcggagggtggagggtggccagctgatc
aaggacctgcctgtgaagacgatggaggagttgctgggtgccgttaccccttacgagctg
caggctgaggtcgatgccctgggcgtcgtggaggaggcggcgggcccgccggcgagcgcc
gtccccggcgccgacctgcgtgtgacggccgtgctggcgggcggcgcggcgcacgtggtg
cccatgacccaggagcccagacggctgggtctggtgacgcagaaggtggtagtcctggtc
gagcagctgctgcagtaccgggggacggccacccagaatgagactgatggctcgtgctgg
agcggcatcgtctttgtgacacggcggctggcctgctgggccgtgcacatgctgctgagc
acgctgccctgcacgcgcgctttcctcagaacggccgctgtcacggggtaccagcagcgc
actggcgaggccgtgggcgtcaggcaccaagaggagaccctgcgcgggttcaggcagggc
accttgaacctgctggtggccacggcggtcgtggaggagggcatcgatgtccgtcgttgc
cagctggtggtgcgattcgacctcccgcccaccgcgcaaagctacatccagtcacgtgga
cgggcgcgcatgcagaacagcgtactgatcctcatggtgcagacagagcttcccgaggag
ctggagatgatcaatcacatgatcaagtttgaggcggatttgaggcaggaggtgctgtcc
aatattcacaagatgaaggcgaggcggagggatggggacgaggagctgcggtacatggtg
gccagcaccggcgcacgagtgagcgcaggtaacgtcctccgactcctccacacctacatc
tccaagctgcccactgacaggcaagcgtactccatcctgcggccaacctaccgcacagag
gcactgctcgacggcatgtacttgacccatgccttcctgcccagcaactgccccctgcgg
gagacggtgggcatgccgcaatccacccgccgaaagtccatcgcctcagcggccctcaac
gccatccggctcctgcacgagtctgggagcctgaacgacaacctcctgccggcagcattc
gagctggcagccgagcggcgacacgcttccggcgtgcagtcgggaggcttccaccctcct
gcacccagcggggagcatggggaggtgctgctgcacccatacaggtggctggtggtggac
gacaggagcaggactctggccgccagctcctctggtccggccaaggccatgcgggacctg
gtatgcctgctgctggagcccctgcccgagggcctacccccttgccggctgccaggcaac
gacggcgcctccaaccagctcgccttcctccccggcccggccgtgcgcgtctccggcgac
cagcttcgacagctcaaggcctgccacgtggcgctggcgcagctcatgctggcgcggggg
cccccgcgccacgctgctgggcagcggcggaaggctgaggttgcggtcgcagtggcagca
gaggcagccgatggagagggtgggatggtgccggagccggatgagatcgtggccggggcg
acgggaggcacggcgccggcgcctccccacgccgacattgggcgtgcaggggttgcacat
gaggcagcaccgacgccccacgatgaccgacctgaggacaaaggagccggtctgttcgtg
cgagccctggtgcgccggataatcgaccgcgtgatcatcctacaggacggccacctgccc
aagagccggcggggcaaggcgtccagggctgcgggggtgtccccggaggcgctcagcttc
ctgctggctcccgcagccccaagcggcgacggcagcatagactggaggctggtggccgag
gtatgtggggacgccggatccacatccgtgctggcgctgctgcgcaggggggtggacctg
cgggaccgcatcatctggacgacctacaaccgtaaggtccacgccttcaggggcgtgcgg
cacgacttgaacctgcagtccacgttcaagaccagcgaggaccgcggctcagccccacgc
ggcaagcgtcgggctgcaggggcggcgcccgctgccgtctccgcggccgggagccccgcc
gacgaggccccgcccacgacgacccgcacctcctacgccgcctactacgccgagcgttgg
ggcctgccgaacctggaccccggccagccgctcatcgaagccagcgcctggaagcagggc
gcgggcgggcgcctggatgcggccgcggagccggaggagggcgaggcctccgtggccctg
gtgccggagctgacgctgcgcaggcccagcctggcgctgctgcgcacggcgctgacgctg
cgctcggcgggcgagggcagcgactacgagacgctggagacgctgggggacaccttcatg
aagtacgcggtgtgcgccgagctcttcttcgagaaccgcacctaccatgagggccagctg
acgcggtgcaaggacgacgtggtgtccaacctgagcctggcacagcgggcgcaggcactg
ggcctgcacagcgccctccaggtgctgcccttctccgtgggcaactggacggcgccgccc
atcgtcaaggtgggcggcaaggtgctggcagacggcatggaggccctggtgggggctttt
gtggtgggcagcggagaagaggccacccgcgtcttcatgagggtcctgggcctgctcaag
gccctccagcccagctcaaagctggagccggcgccgggcggggatgccgacgtggcgcac
caggaggtcgacgtcgacgccatccagagggtgctcgggtacacctttgcccgccccggc
ctggtgtgcgaggcgctgacgcactgctcctggagcgggcgcaacggcagctgctaccag
cgcctggagttcctgggggatgccctgctggacctggtggtggtccagcactgcttcgac
tccttcacggacgtggagccgtcagacctgcacgacatgcggtctgtggcggtgaacgcc
gagcgcctggcctttgtggctgtccaccacggcctgcagcgccacatccggcatgcctcg
cccaagctcctctcccacctcaccgactttgtcagcatgtggcgtgatgaggagacgctg
cagaccttcagtggcgccctgccagagtacaagctggtggcctgggtgcaggaaagggcc
cacgtccaagtcagctgcatggacgtgcttcttggggagagcaagggcgggaggaacgca
cggtcctctggccggctggcggcgcaggatgcactggacaggtggcgggagctggagccg
aagctgcgagaggcgctggtgctgcgggcggccgctaagaaggatgggcttgcctcgatg
aaaactccaaagctggtccgtgcttga
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integrated database retrieval system
