Amycolatopsis pretoriensis: MUY14_00850
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Entry
MUY14_00850 CDS
T08335
Name
(GenBank) rhamnogalacturonan lyase
KO
K18197
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
aprt
Amycolatopsis pretoriensis
Brite
KEGG Orthology (KO) [BR:
aprt00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
MUY14_00850
Enzymes [BR:
aprt01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
MUY14_00850
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Gene cluster
GFIT
Motif
Pfam:
RGL11_C
RGI_lyase
FG-GAP_3
FG-GAP
EF-hand_5
Motif
Other DBs
NCBI-ProteinID:
UOX89227
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Position
258852..260663
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AA seq
603 aa
AA seq
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MSLRTSALSRLLAVGLLAAGLAPAPAGAAAAPQIDELNRGVISVHSTAGNRVGWRLLAGD
PAGVAFAVYRDGTRVTTTAAGGPTGYLDAGAPAGAKYTVHAVVDGVERMSAFAAEESLSL
DSTAAASTRDVPIQVPAGGTTPSGESYTYSANDASVGDLDGDGQYEFVVKWDPSNAKDNS
QSGYTGNVYVDAYRLDGTRLWRIDLGRNIRAGAHYTQFQVFDYDGDGKAEVAMKTADGTR
SGTGQVIGNASADYRNSSGYVLSGPEFLTVFNGQTGAAAATVNYDPPRGTVSSWGDSYGN
RVDRFLAGTAYLDGSRPSLIMSRGYYTRTVIAAWDFRGGALTERWKFDSNTAGSQYTGQG
NHQLAIADVDADGRDEIVFGAMAINDNGSPLWNTRLGHGDAMHVGDLIPGRPGLEEFKVD
EDTSKPGAWMADAKTGQILWQLPCGCDNGRGVSDDIWAGSPGAESWSSGVAGLLNTSGQN
TGRKPSSANFVVWWDGDAQRELLDGTHIDKYGTGADTRLLTASGVHADNGTKNTPAVQAD
LFGDWREEVVWATSDNRALRIYSTTDPTSISHVSLMQDRQYREAVAWQNTAYNQPPHPSV
NPA
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atgtccttgcgcacatccgccctcagccggctgctggccgtgggcctgctggcggccggg
ctcgccccggccccggccggcgcggccgccgcaccgcagatcgacgagctgaaccgcggg
gtgatcagcgtccacagcacggcgggcaaccgggtcggctggcggctgctcgccggcgac
ccggccggggtggcgttcgccgtctaccgcgacggcacccgggtgaccacgaccgcggcc
ggcggcccgaccggctacctggacgccggggcgcccgcaggggcgaagtacaccgtgcac
gcggtcgtcgacggcgtggagcggatgtcggcgttcgccgcggaggagtcgctgtcgctc
gacagcacggccgcggcgagcacccgtgacgtgccgatccaggtcccggccggcggcacg
acgccgtcgggcgagagctacacctacagcgcgaacgacgctagcgtcggcgacctggac
ggcgacgggcagtacgagttcgtcgtgaagtgggatcccagcaacgccaaggacaattcg
cagtccgggtataccggcaacgtctacgtcgacgcctaccggctggacggcacgcgcctg
tggcggatcgacctcggccgcaacatccgcgcgggcgcgcactacacgcagttccaggtc
ttcgactacgacggcgacggcaaggccgaagtcgcgatgaagaccgcggacggcacgcgc
tcgggcaccggccaggtcatcggcaacgcgagcgcggactaccgcaactccagcgggtac
gtgctgtccggcccggagttcctgaccgtgttcaacggccagacgggcgcggcggcggcc
acggtgaactacgacccgccgcgcggcacggtgtcgtcgtggggcgacagctacggcaac
cgcgtcgaccgcttcctggcgggcacggcgtacctcgacggctcgcgcccgagcctgatc
atgagccgcggctactacacgcgcacggtgatcgcggcctgggacttccgcggtggcgcg
ctgaccgagcgctggaagttcgactcgaacacggccggctcgcagtacaccggccagggc
aaccaccagctggcgatcgccgacgtcgacgcggacggccgtgacgagatcgtcttcggc
gccatggcgatcaacgacaacggcagtccactgtggaacacccggctcggccacggcgac
gcgatgcacgtcggcgacctgatcccgggccggccggggctggaagagttcaaagtggac
gaagacacgtcgaagccgggcgcctggatggccgacgcgaagaccgggcagatcctgtgg
cagttgccgtgcggctgcgacaacggccgcggggtgtcggacgacatctgggcgggcagc
ccgggtgcggagtcctggtcgtccggggtggcggggctgctgaacacgagcggccagaac
accgggcgcaagccgtcgtcggccaacttcgtcgtctggtgggacggcgacgcccagcgc
gaactgctggacggcacgcacatcgacaagtacggcaccggcgcggacacgcgcctgctg
acggcgtcgggcgtgcacgccgacaacggcacgaagaacacgcccgcggtgcaggcggac
ctgttcggggactggcgcgaggaagtcgtctgggcgacgtcggacaaccgggccctgcgc
atctattcgacgaccgacccgacgagcatctcgcacgtgtcgctgatgcaggaccggcag
taccgggaagccgtggcgtggcagaacaccgcgtacaaccagccgccgcacccgagcgtc
aatccagcgtga
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