Aquimarina sp. ERC-38: NBT05_05230
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Entry
NBT05_05230 CDS
T09583
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
aqe
Aquimarina sp. ERC-38
Pathway
aqe00521
Streptomycin biosynthesis
aqe00523
Polyketide sugar unit biosynthesis
aqe00541
O-Antigen nucleotide sugar biosynthesis
aqe01100
Metabolic pathways
aqe01110
Biosynthesis of secondary metabolites
aqe01250
Biosynthesis of nucleotide sugars
Module
aqe_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
aqe00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
NBT05_05230 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NBT05_05230 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NBT05_05230 (rfbC)
Enzymes [BR:
aqe01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
NBT05_05230 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
RNA_pol_RpbG
Motif
Other DBs
NCBI-ProteinID:
UZO81868
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Position
1231412..1231957
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AA seq
181 aa
AA seq
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MIAEETHLKGCFILKPSIFEDKRGYFFESYNQKKFEDILGEQITFVQDNQSLSDYGVLRG
LHFQRGQHAQAKLVRVLSGKVLDVAVDVRENSSTFGEHVAIELSEENKKQFYLPKGFAHG
FVVLSKTAVFSYKCDNYYNKASEGGIIYNDVNLNIDWQLPKNKIIISERDSSLPKFETTE
L
NT seq
546 nt
NT seq
+upstream
nt +downstream
nt
atgattgcagaagaaactcatttaaaaggttgttttattttaaaaccttcgattttcgaa
gataaaagaggatatttctttgaaagttataatcaaaagaagtttgaagatatattggga
gaacaaataacctttgtacaggataatcaatctttgtcagattatggagtattgagaggt
ttacattttcaaaggggtcaacatgctcaagcaaaacttgttagagtattatctgggaag
gtcttagatgttgcagttgatgtgcgtgaaaattcaagtacctttggcgaacatgtagcg
atagaactttcagaagaaaataaaaaacaattttatttaccaaaaggttttgcacatggg
tttgtagtattaagtaaaacagcagttttcagctataaatgtgataattattataataaa
gcctcagaaggtggcataatttataatgatgttaatcttaatattgattggcaactacca
aaaaataaaatcataatttctgaaagagatagttcattacctaaatttgaaaccaccgaa
ctatga
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