Amphimedon queenslandica (sponge): 100632485
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Entry
100632485 CDS
T02284
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03022
Basal transcription factors
aqu03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100632485
09124 Replication and repair
03420 Nucleotide excision repair
100632485
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aqu03021
]
100632485
03400 DNA repair and recombination proteins [BR:
aqu03400
]
100632485
Transcription machinery [BR:
aqu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100632485
DNA repair and recombination proteins [BR:
aqu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100632485
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
Motif
Other DBs
NCBI-GeneID:
100632485
NCBI-ProteinID:
XP_019849204
UniProt:
A0A1X7VEE5
LinkDB
All DBs
Position
Unknown
AA seq
445 aa
AA seq
DB search
MATSCDLLTYLQSLPSAVLTRLYQHPPSCLAVYRSLSELGQLYIMRVLFIERPLPLADIN
SWALPGNNLHAETLSLLNKLHIFEPVLIRTGQQQGYQLNQSYQTNLRILICGGGQLWAVP
GHRGDDKHSRDIPYLNDYADKKWENILNFMVGGSEKLDSEIVQVLQYAGLMSQASSRHPS
FITTLGFQFLLMDTQSQIWQFILQYLNTAQDRGMDLIDCLKFIFQLSFSTLGKDYSTKGL
TESQLTFMYHLCQFGLVYQRKSSSKRYYPTKLVIQLTAGQQSRNTSQAGFIIVETNYRVI
AYTDSKLHIATLALFCQMQYRFPNVAVGTITRESIQQALVHGIKADQIISFLTQHAHHNM
LSKAHILPPTVTDQIKLWEIERNRLSFQEGILYSEFLSVTDYEKVKKYAEDLGVLLWSNR
QRRLMVIHPDRHDEIRHFWKRQKSS
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccagttgtgatcttttaacatacttacaatcccttccttctgctgtactaact
cgtctttatcagcatccgccatcttgtctagctgtatacaggtcactatcagaattaggt
caattgtatattatgagagtgttatttatagagcgtccattgcctctagcagatattaac
tcttgggctcttcctggaaacaacttacatgcagagacactctcgctgttgaacaagctc
cacatttttgagccagtactaatcagaaccggacagcagcaaggctaccagctcaaccaa
tcataccaaaccaacctaagaatactaatctgtggaggagggcagctgtgggcggtacct
ggtcaccgtggtgatgacaaacactccagggatattccctacctgaatgactatgcagat
aaaaaatgggagaacattctcaatttcatggttggaggcagcgagaagttggactcagaa
atagttcaagtgttacaatacgctggactcatgagccaggcgtcttcaagacatccatcc
ttcattacaactcttggattccagtttctactaatggacacacagtctcagatatggcag
ttcatactacagtacttaaatacagcacaagatagaggaatggatctcattgattgcttg
aagtttatctttcagttaagtttttcaactcttggaaaggattactctactaaaggtctt
actgaatcgcagctaacgttcatgtatcatttatgtcagtttggtctagtgtatcaaaga
aagagtagctcgaaaagatactaccccacaaaactggtgatacagctaactgcaggtcag
caatcaaggaataccagtcaagcaggtttcattatcgtggagacaaattatcgcgttatt
gcctatacagattccaaacttcacatagccactttagcattgttctgtcagatgcaatac
aggtttcccaatgttgctgtaggcactattactagagagagcattcaacaggctttggtt
catggcataaaggcagatcagatcatatcatttttaacacaacacgctcaccataacatg
ctctcaaaggcacacatattaccacctactgtaaccgatcagatcaaactgtgggaaatt
gaaaggaacaggctaagctttcaagagggtatattatattctgaattcttatctgtcact
gactatgaaaaagtgaagaaatacgcagaggatcttggtgttctgctgtggagtaataga
caaaggcgactgatggtgatccatcctgacagacatgatgagataagacacttctggaaa
agacagaaatcatcttaa
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integrated database retrieval system
