Amphimedon queenslandica (sponge): 100637238
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Entry
100637238 CDS
T02284
Name
(RefSeq) THO complex subunit 1-like
KO
K12878
THO complex subunit 1
Organism
aqu
Amphimedon queenslandica (sponge)
Pathway
aqu03013
Nucleocytoplasmic transport
aqu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aqu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100637238
09122 Translation
03013 Nucleocytoplasmic transport
100637238
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aqu03019
]
100637238
03041 Spliceosome [BR:
aqu03041
]
100637238
Messenger RNA biogenesis [BR:
aqu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
100637238
Spliceosome [BR:
aqu03041
]
Complex C
Other components
EJC/TREX
100637238
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100637238
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
efThoc1
Motif
Other DBs
NCBI-GeneID:
100637238
NCBI-ProteinID:
XP_003382878
UniProt:
A0A1X7VU87
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MASSETRSRFAQSIHQTLKNGASSPSLLQEAFGKASGNDNDKKSIFEQSFRDVLRDLIAK
DPLVSSFSSLVSLSVLCAESQICYHSVPFLLLSDAFDCITLDFCEKLFDTVESHVTVWTK
QDFFSSGRILLLRMCNDLLRRLSSSLNTVFCGRIQLFLARLFPLSEKSALNLMSHFNLEN
VTSFKTLQTPPSSSEPQKPPGGNTNEDGEDMEIDALDQETGMTPVDYNLYEKLWTLQDFF
RHPVQCFHSDRWKKFTGTVQEVLQSFSSYKLEDIQSKRRKLQSSDEGMDTLSPYTSSHYF
TKYLTSENLLSLQLSDSHFRRHVLIQFLILFQYLTGDVKFKNSSQVLSESHSSWVTETTS
KVYQLLEETPPDGKSFAEYVKLVIQREETWIAWKNGGCPSFEKTNSKPPNRGGGGDTKER
LGERLFAMKEEKDMGSKELSRLWNLCPDNLESCSSPERIFVPPLEIFLEEPLEEMKPNCE
IPKEDRWISNPNFRWQALRLLSCESTHFFPIANQSSMRPLEEYLDHVILQTSKEF
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagtgaaaccaggtctcgttttgctcaatccatccaccagacattgaaaaat
ggagccagctctccctccctccttcaggaagcctttggaaaagcctctggaaacgacaat
gataagaaatctatatttgagcaatcctttcgtgacgtgttgagggatctcattgcaaag
gatcctctcgtctcctcttttagctctctcgtctccctatcagtcctttgtgccgagtct
cagatatgctatcattctgttcctttccttctcctctctgatgcctttgattgcattacc
ctcgacttctgtgaaaagctatttgataccgtcgagtctcatgtgacagtgtggactaaa
caggatttcttttcttctgggaggattcttctcctacgaatgtgtaatgacctccttcga
cgtctctcctcgtccctcaacaccgtcttctgtggacggattcagctcttccttgctcgt
ctttttcctctctctgagaaatctgccctaaacctcatgagtcacttcaacttggagaat
gtcacgtcattcaagaccctgcagacacctccctcttccagtgaaccccagaaacctccc
gggggtaataccaacgaagacggcgaggatatggaaattgatgccctggatcaagagacg
ggtatgactccagttgattataacctgtatgagaaactctggactctacaggatttcttc
cgacatccggtccagtgttttcactctgatcgctggaagaaatttactggaacagtccaa
gaggtactccagtcattctctagctataaactagaagacattcagagcaagagaaggaag
ctacagtcttcagatgaaggaatggataccttgtcaccgtacaccagttcgcattatttc
actaaataccttaccagtgagaatttgctctccctgcaactcagtgactctcatttccgt
cgccacgttctcatccagttcctcattttgtttcagtacttgactggggacgtcaaattt
aagaactcgtctcaggttttgagtgagtctcattcctcgtgggtcaccgaaaccacaagt
aaagtgtatcagttgcttgaggaaactccacccgacggcaaatcttttgccgaatacgtg
aaacttgtcattcagagggaagagacttggatagcatggaagaatgggggttgtccctcg
tttgaaaaaaccaattcaaaacctcccaacagaggagggggaggagatactaaggagaga
ttaggcgagaggttgtttgcaatgaaagaggagaaggacatggggagcaaagaactatca
cgactatggaacctatgccctgataatcttgagtcctgttcgtcgcccgagcgtatcttt
gtacctcctttagaaatctttctcgaggagccgctagaggagatgaagcctaactgtgag
atacccaaagaagacaggtggatatcgaatcctaatttccgctggcaggcactgcggctt
ctctcgtgtgagagcactcatttctttccgattgcaaaccagtcatcgatgagacctctt
gaagagtatcttgatcacgtcatactccagacttcaaaggaattttag
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