KEGG   Amphimedon queenslandica (sponge): 100637238
Entry
100637238         CDS       T02284                                 
Name
(RefSeq) THO complex subunit 1-like
  KO
K12878  THO complex subunit 1
Organism
aqu  Amphimedon queenslandica (sponge)
Pathway
aqu03013  Nucleocytoplasmic transport
aqu03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:aqu00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    100637238
  09122 Translation
   03013 Nucleocytoplasmic transport
    100637238
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:aqu03019]
    100637238
   03041 Spliceosome [BR:aqu03041]
    100637238
Messenger RNA biogenesis [BR:aqu03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     100637238
Spliceosome [BR:aqu03041]
 Complex C
  Other components
   EJC/TREX
    100637238
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    100637238
SSDB
Motif
Pfam: efThoc1
Other DBs
NCBI-GeneID: 100637238
NCBI-ProteinID: XP_003382878
UniProt: A0A1X7VU87
LinkDB
Position
Unknown
AA seq 535 aa
MASSETRSRFAQSIHQTLKNGASSPSLLQEAFGKASGNDNDKKSIFEQSFRDVLRDLIAK
DPLVSSFSSLVSLSVLCAESQICYHSVPFLLLSDAFDCITLDFCEKLFDTVESHVTVWTK
QDFFSSGRILLLRMCNDLLRRLSSSLNTVFCGRIQLFLARLFPLSEKSALNLMSHFNLEN
VTSFKTLQTPPSSSEPQKPPGGNTNEDGEDMEIDALDQETGMTPVDYNLYEKLWTLQDFF
RHPVQCFHSDRWKKFTGTVQEVLQSFSSYKLEDIQSKRRKLQSSDEGMDTLSPYTSSHYF
TKYLTSENLLSLQLSDSHFRRHVLIQFLILFQYLTGDVKFKNSSQVLSESHSSWVTETTS
KVYQLLEETPPDGKSFAEYVKLVIQREETWIAWKNGGCPSFEKTNSKPPNRGGGGDTKER
LGERLFAMKEEKDMGSKELSRLWNLCPDNLESCSSPERIFVPPLEIFLEEPLEEMKPNCE
IPKEDRWISNPNFRWQALRLLSCESTHFFPIANQSSMRPLEEYLDHVILQTSKEF
NT seq 1608 nt   +upstreamnt  +downstreamnt
atggcctccagtgaaaccaggtctcgttttgctcaatccatccaccagacattgaaaaat
ggagccagctctccctccctccttcaggaagcctttggaaaagcctctggaaacgacaat
gataagaaatctatatttgagcaatcctttcgtgacgtgttgagggatctcattgcaaag
gatcctctcgtctcctcttttagctctctcgtctccctatcagtcctttgtgccgagtct
cagatatgctatcattctgttcctttccttctcctctctgatgcctttgattgcattacc
ctcgacttctgtgaaaagctatttgataccgtcgagtctcatgtgacagtgtggactaaa
caggatttcttttcttctgggaggattcttctcctacgaatgtgtaatgacctccttcga
cgtctctcctcgtccctcaacaccgtcttctgtggacggattcagctcttccttgctcgt
ctttttcctctctctgagaaatctgccctaaacctcatgagtcacttcaacttggagaat
gtcacgtcattcaagaccctgcagacacctccctcttccagtgaaccccagaaacctccc
gggggtaataccaacgaagacggcgaggatatggaaattgatgccctggatcaagagacg
ggtatgactccagttgattataacctgtatgagaaactctggactctacaggatttcttc
cgacatccggtccagtgttttcactctgatcgctggaagaaatttactggaacagtccaa
gaggtactccagtcattctctagctataaactagaagacattcagagcaagagaaggaag
ctacagtcttcagatgaaggaatggataccttgtcaccgtacaccagttcgcattatttc
actaaataccttaccagtgagaatttgctctccctgcaactcagtgactctcatttccgt
cgccacgttctcatccagttcctcattttgtttcagtacttgactggggacgtcaaattt
aagaactcgtctcaggttttgagtgagtctcattcctcgtgggtcaccgaaaccacaagt
aaagtgtatcagttgcttgaggaaactccacccgacggcaaatcttttgccgaatacgtg
aaacttgtcattcagagggaagagacttggatagcatggaagaatgggggttgtccctcg
tttgaaaaaaccaattcaaaacctcccaacagaggagggggaggagatactaaggagaga
ttaggcgagaggttgtttgcaatgaaagaggagaaggacatggggagcaaagaactatca
cgactatggaacctatgccctgataatcttgagtcctgttcgtcgcccgagcgtatcttt
gtacctcctttagaaatctttctcgaggagccgctagaggagatgaagcctaactgtgag
atacccaaagaagacaggtggatatcgaatcctaatttccgctggcaggcactgcggctt
ctctcgtgtgagagcactcatttctttccgattgcaaaccagtcatcgatgagacctctt
gaagagtatcttgatcacgtcatactccagacttcaaaggaattttag

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