Ascochyta rabiei: EKO05_0001475
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Entry
EKO05_0001475 CDS
T09445
Name
(RefSeq) RNA helicase
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
arab
Ascochyta rabiei
Pathway
arab03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EKO05_0001475
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
arab03041
]
EKO05_0001475
Enzymes [BR:
arab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EKO05_0001475
Spliceosome [BR:
arab03041
]
Complex A
U2 snRNP components
U2 related factors
EKO05_0001475
Complex B
EKO05_0001475
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
OLD-like_TOPRIM
Motif
Other DBs
NCBI-GeneID:
62211008
NCBI-ProteinID:
XP_038802231
LinkDB
All DBs
Position
2:1749899..1753480
Genome browser
AA seq
1193 aa
AA seq
DB search
MATRHADSSRHDRARYSPPRRDRSRSPVRRDRSRDRYTDRYPATARRDDRHTDDRHIDRD
RDRDRDRDRGGRDRRDDRRDDRRDERRDERRDRRRSRSPPPRRDRDRSRDRRHARDDRYR
RDDRSRDRHDTRRRSTSRRSTSRRPPSSATTPAPDSRRPDRLTSLSRDDRTHPDKHQEDK
QAARAAKLAEWKKRNAERLAKDKGPDSPNAVASPTPTPTAPSTPTAAAAATPLPSGSADE
PAKPKAPLKTATEKLKQKQPEKSTFRLDESAAARPLAAKPAGKPVTTKPAFAHAAKTNAK
TNTNTNTNTNIGAFGLKPKPALDEAATTKKAFLEDDTDTGKRKFQALPAFAPIDHADALP
DPDADDDDETAMDDMGSDDEENNAQLQARLEKRRADMAANQDTSMQEAPAAEAPAADDAA
ESMDVDGAAAAAAAATAAAEQDDVDPLDAFMADLTEPAPSRAPPQGTAMFNDDHEPEQTS
VEAEDLLAMSAAKKKKKEVPVIDHAKVDYEPFRKNFYTEPSEVSAMTAEEVADLRHDMDG
IKVKPDDVPRPVTKWAQMGLLQATMDVFQRVHYDRPTSIQAQAIPIAESGRDLIGVAKTG
SGKTLGFGIPMIRHILDQRPLKPSDGPIGLILAPTRELSLQIVNELKPFLNASGITIKCA
YGGQPISDQIAMIKRGGIHVLCATPGRLIDLLQSNSGRVLSFRRITYVILDEADRMFDMG
FEPQVMKILANVRPDRQTILFSATFPKNMAALARKALHKPAEVIIGGRSKVAPEITQIIT
LVQPSYEKKISKLLLHLGQLFSDDENAQVLIFTEKQETAEDLLSKLFKAKYYSVNTIHGA
KDQTDRNEAINDFKQGVLSILIATSVAARGLDVPGLAMVFNFDCPTHLEDYVHRCGRTGR
AGNKGTAITLLEDPGQERFAVHIMKALRESDTQVPEGVQSMADTFLEKAKAGTEKFFGGF
GGKGLDRLDAARALEKKREKRAHKVEGEEESDEEPELPALKKPEVAGPGIVKATEKAADK
AEEDQPVWMKLLNSKIVVQKTERPEAAASGKPMSAKERALAAANKVDGRLSKKGMIHAGQ
PIDNKGPDAGLYHSTIEINDFPQKARWAVTNRTNVAKILENTGVSITTKGTFYGPGKEPG
ELDLPKLYILVEGDTENVVTQAMMELTRLLREGTIAAEDASAVRGPTGRYNVV
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcgccacgctgattcatcaaggcacgaccgcgctcgctactctccgccccgc
cgcgaccgatcccgctcgcccgtccgccgcgaccgctcgcgagatcgctacaccgaccgc
tacccggccaccgccaggcgcgacgaccgccacaccgacgaccgccacatcgaccgggac
cgcgaccgggaccgggaccgggacagagggggccgcgaccgcagagacgaccgccgggac
gaccgccgggacgagcgcagagacgagcgcagagaccgccgccgctcgcgctcgcccccg
ccccgccgcgacagggaccgttcacgcgaccgccgccatgcccgcgacgaccgctaccgc
cgcgacgacaggagccgcgaccgccacgacacccgccgccgctccacctcccgccgctcc
acctcccgccgcccaccctcctccgccaccacccccgcgcccgacagcagacgccccgac
cgcctgacctccctctcgcgcgacgacaggacccaccccgacaagcaccaggaagacaag
caggccgcacgtgccgccaagctcgccgagtggaagaagcgcaacgcagagcgcctggcc
aaggacaagggccccgactccccgaatgccgtcgcctcgcccacccccacccccaccgcc
ccctcgacccccaccgccgctgctgctgccacgccgctgccgagtgggtccgccgacgag
cccgcaaagccaaaagcacccctcaagaccgctaccgagaagctcaagcagaagcagccc
gagaagtcgaccttcaggctcgacgagtcggccgccgctcgaccgctcgctgccaagccc
gccggcaagccagtgacgaccaagcctgcctttgcacacgccgccaagaccaacgccaag
accaacaccaacaccaacaccaacaccaacatcggcgcctttggcctcaagcccaagccc
gccctcgacgaggcagccacgacgaaaaaggccttcctcgaagacgacaccgacacgggc
aagcgcaagttccaagccctgccagcctttgcccccatcgaccatgcggacgccctgccc
gaccccgacgccgacgacgacgacgaaaccgccatggacgacatgggcagcgacgacgaa
gagaacaacgcccagctccaggcccggctcgagaagcgccgcgctgacatggccgccaac
caagacaccagcatgcaagaagcccccgccgcagaggcccccgccgccgacgacgccgca
gaaagcatggacgtcgacggggccgctgccgctgccgctgccgcaaccgctgccgccgag
caagacgacgtcgacccgctcgacgccttcatggccgacctcaccgagcctgcccccagt
cgagcaccgccgcagggcaccgccatgttcaacgacgaccacgagcccgagcagacgtcg
gtcgaggccgaagacctcctcgccatgagcgcggccaagaagaagaagaaggaagtgccc
gtcatcgaccacgccaaagtcgactacgagcccttccgcaagaacttctacacggagccc
tccgaggtctccgccatgacggccgaagaagtcgccgatctgcgccacgacatggacggc
atcaaggtcaagcccgacgacgtgccccgtcccgtcacaaagtgggcccagatgggcctg
ctgcaggccaccatggacgtcttccagcgcgtgcactacgaccgacccacttccatccaa
gcccaagccatacccattgctgaatcaggccgcgacctcatcggcgtagccaagactggc
tcgggcaaaacactcggcttcggcatccccatgattcgacacatcctagaccagcgtcca
ctgaagccctccgacggccccattggcctcatcctcgcgcccacgcgcgagctgtccctg
cagattgtcaacgagctgaagccgttcctcaacgcctccggcatcaccatcaagtgcgcc
tacggtggacagcccatctccgatcagatcgccatgatcaagcgaggcggcatccacgtc
ctctgcgctaccccgggacgtctcatcgatctgctgcagagcaactcgggtcgggtcctc
agcttcagacgcatcacctatgtcatcctcgacgaggccgatcgcatgttcgacatgggc
tttgagccacaggtgatgaagatccttgccaacgttcgcccggaccgccagaccattctc
ttctccgccaccttccccaagaacatggccgccctggctcgcaaagcactccacaagccc
gccgaggtcatcatcggcggtcgcagcaaggtcgcccccgagatcacgcagatcatcacc
ctcgtgcagccctcgtacgagaagaagatttccaagctgctcctgcacctcggccagctg
ttctccgacgacgagaacgcgcaggtcctcatcttcacggagaagcaagagacggcagaa
gacctcctctccaagctgttcaaggcgaagtactactcggtcaacacgatccacggagcc
aaggaccagacagatcgcaacgaagccatcaacgacttcaagcagggcgtcctctccatc
ctgattgccacatcggtcgctgctcgtggtttggatgtgccaggcctggccatggtcttc
aacttcgactgccccacccacctcgaagactacgtccaccgctgcggacgcactggtcgc
gccggcaacaagggcacggccatcactctgctcgaggacccagggcaagagcgcttcgcc
gtccacatcatgaaggcactccgggagagcgacacccaggtccccgaaggcgtccagagc
atggccgacaccttcctcgagaaagcaaaggcgggcaccgagaagttcttcggcggcttc
ggcggcaagggtctcgaccgcctcgacgccgcccgcgcgctcgagaagaagcgcgagaag
cgcgcccacaaggtcgaaggcgaggaggaatccgacgaagagcccgagctccccgcgctc
aagaagcccgaagtcgccggcccgggcatcgtcaaggcaaccgaaaaggccgccgacaag
gccgaggaggaccagcccgtctggatgaagctgctcaactccaagatcgtggtccagaag
acggaacgccccgaggccgcggcgagcggcaagcccatgtcggccaaggagcgcgccctg
gccgccgccaacaaggtcgacggccgcctcagcaaaaagggcatgatccacgccggccag
cccatcgacaacaagggcccagacgccggcctgtaccacagcaccatcgagatcaacgac
ttcccgcaaaaggcccgctgggccgtcacgaaccgcaccaacgtcgccaagattctcgaa
aacacgggcgtctccatcaccacaaagggcaccttctacggccccggcaaagagcccggc
gagctcgatctgcccaagctgtacatactcgtcgagggcgacacggagaacgtcgtcacc
caggccatgatggaactcaccaggttgctgcgcgagggcaccattgccgccgaagacgcg
agcgccgtccgcggacccacgggccgctacaacgtcgtctga
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integrated database retrieval system
