KEGG   Ascochyta rabiei: EKO05_0001761
Entry
EKO05_0001761     CDS       T09445                                 
Name
(RefSeq) uncharacterized protein
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
arab  Ascochyta rabiei
Pathway
arab03030  DNA replication
arab03410  Base excision repair
arab03420  Nucleotide excision repair
arab03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:arab00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    EKO05_0001761
   03410 Base excision repair
    EKO05_0001761
   03420 Nucleotide excision repair
    EKO05_0001761
   03430 Mismatch repair
    EKO05_0001761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:arab03032]
    EKO05_0001761
   03400 DNA repair and recombination proteins [BR:arab03400]
    EKO05_0001761
Enzymes [BR:arab01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     EKO05_0001761
    6.5.1.6  DNA ligase (ATP or NAD+)
     EKO05_0001761
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     EKO05_0001761
DNA replication proteins [BR:arab03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    EKO05_0001761
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     EKO05_0001761
DNA repair and recombination proteins [BR:arab03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     EKO05_0001761
   NER (nucleotide excision repair)
    Other NER factors
     EKO05_0001761
   MMR (mismatch excision repair)
    Other MMR factors
     EKO05_0001761
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase
Other DBs
NCBI-GeneID: 62211290
NCBI-ProteinID: XP_059491729
LinkDB
Position
2:join(2661577..2661782,2661846..2663144,2663195..2663729,2663776..2664537)
AA seq 933 aa
MPARFSAPSCTTLPYRLAARTLQSTRPQLLSAATLCRHQPRRSPPCSLSAMPPKQATLGY
VKSSQTTLGKFFGKNGAPAQQQSKLSFSTKTKTEKKDAEPRGEPGSSPADLKMESGQAAE
ASVEVDGAPVEAGKKRQVKEEEEDSEDEPPTKRQRRRPAKETESNKTKPAPKKGEKPAAT
PKKPAAASKPVKEEVEDEEEEVPEPKKAVKGKKEAQKSPTPVAEDDAMSDAKDEDGVLSS
GEEPEEVKTKARKKIQTTLTSNTKDLFPDWKPGEPVPYAALCTTFSKIEMTTKRLEILAH
CSLFLRQVMRLTPSDLLPTVMLMINKLAADYAGIELGIGESLIMKAVSESTGRSLQHIKS
DQQEIGDLGLVAAKSRSKQPTMFKPKPLTVAGVHKGLMAIATTTEGQGAQGRKVDGIKKL
LSAADAHNAGKHVDIEENKGGASEAKFIVRTLEGKLRLGLAEKTVVVALAQAVKFHEMSQ
NGKTPSTADLAEAESTLKTVYSELPSYEVIVPAMLEHGLSNLRDNCRLQPGVPLKPMLAK
PTKSITEVLDRFEGKDFTCEYKYDGERAQIHFVAHDADMEMATAAPSAGKSDRGVSNIFS
RNSEDLSKKYPDILAKLPTWVHEGTKSFVLDCETVAWDMVEKKVLPFQQLMTRKRKDVKV
EDVKVKVCVFAFDILYLNGEALVTKSFRKRREALNSAFVPVEGEFALAKFGDTNDLDTIQ
TLLEDSVKEGCEGLMVKMLDGPESYYEPSKRSQNWLKVKKDYLAGVGDSLDLVVLGAYYG
KGKRTSWYGAFLLACYNPNTEKYETVCNIGTGFSEAILEQFHKQLSTIVIERPKPFYTHS
AGNKDQPDVWFEPRHVWEVKTADLTLSPRYKAAAAEVGGGGKGVSLRFPRFIKERDDKKP
DQASSARMIAEMYQRQESVGKNKGPSADDDFEY
NT seq 2802 nt   +upstreamnt  +downstreamnt
atgcccgcacgcttcagcgctcccagctgcacaacgctcccatatcgcctggccgctcgc
acccttcagtcaactcgaccgcaattgctctctgctgccactctctgccgccatcagcct
cgccgctcgccgccgtgcagcctgtccgctatgccgcccaagcaggccactctggggtac
gtcaagtcttcccagaccacactcgggaagttcttcggcaagaacggcgcccccgcgcaa
cagcagtcgaagctgtccttctccaccaagacgaagaccgagaagaaagatgcagagccg
agaggagaacccggctcctcgcccgcggatctgaagatggagtctggccaagcggcagag
gcaagcgtggaggtcgacggtgcgcctgtggaggctggaaagaagaggcaggtcaaggag
gaagaggaagactcggaggacgagccccccacaaagcgacagcgacggagacctgcgaag
gagaccgagtccaacaagaccaaaccagccccgaagaaaggcgaaaagccagccgcaaca
ccaaagaaaccggccgccgcctcgaagcctgtgaaggaagaagtcgaagacgaggaggag
gaagtgccagaaccaaagaaggctgtgaagggcaagaaagaggcgcaaaagtcgccgaca
ccggtggcggaggacgacgccatgtcagacgcgaaggacgaggacggcgtgctcagctca
ggtgaagagcccgaggaagtcaagacaaaggctcgcaaaaagatccagacaacactcacg
tccaacacaaaagacttgtttcccgactggaaacccggcgagcctgtgccctacgctgcg
ctctgcaccacattctcgaaaatcgaaatgacaacgaagcgactcgagattttggcgcac
tgctcgctcttcctgcgccaggtaatgcgcttgacaccttcagacctcctgcctacggtc
atgctcatgatcaacaagctggctgccgactatgctggcatcgaactcggaatcggcgag
tcactcatcatgaaagccgtttccgagagcactggacggagcttacaacacatcaagagc
gaccaacaggaaattggagatcttggtctggttgcagcgaagagccggtcaaagcagcct
accatgttcaagcccaagcctttgacagtggcgggcgttcacaagggcttgatggccatc
gcgaccaccaccgaaggccagggtgcccaagggcggaaggtggacggcatcaagaagctt
ctctcggcagcggacgcgcacaacgcaggcaagcacgtcgatatcgaggagaacaagggc
ggtgccagtgaagcaaagttcatcgttcgtacgctggagggcaagctccgactaggactt
gcggagaagacggtcgtagtcgctcttgcacaggcggtcaagtttcatgagatgtcacaa
aatggcaagactccgtcgacggcagacttggctgaggctgagtccacgctgaagactgtc
tacagtgaacttcccagctacgaagtcatcgttccagcaatgctcgagcacggcctctcc
aacttgcgcgacaactgcagattgcaacccggcgtaccgctgaagcctatgctcgcgaaa
ccaacaaagtcgattaccgaagtgctcgatcgtttcgagggcaaagatttcacttgtgag
tacaagtacgatggcgagcgtgcacagatacatttcgttgcgcacgatgcagatatggag
atggcgacagcggctccttctgcgggtaagagcgaccgcggagtatccaacatcttctct
cgaaattcagaagacttgtccaagaagtatccagacattcttgccaagcttcctacctgg
gtccatgaagggacgaagagcttcgtcctcgactgcgaaacagttgcgtgggatatggtc
gagaagaaagtcctgcccttccagcagctgatgacacggaagcgaaaggacgtcaaggtc
gaggatgtgaaggtcaaggtctgcgtgttcgcctttgatatcctctatctcaatggcgag
gctcttgtcaccaaatccttccgcaagcgccgcgaagcactgaacagcgcattcgttccc
gttgaaggcgagttcgccctcgcaaagttcggcgacacaaacgacctcgacaccatccag
acgctgcttgaagactcggtgaaagaaggctgcgaaggcctcatggtcaagatgctcgac
gggccggaatcctactacgagccctcgaagcgctcgcaaaactggctcaaggtcaagaaa
gactaccttgccggcgttggcgactcgctcgatctggttgtcctaggtgcctactacgga
aaagggaaacgcacaagctggtacggtgccttcttgctggcatgctacaatcccaacacg
gagaagtacgaaaccgtgtgcaacatcggaacaggcttttcagaagccatactggagcag
ttccacaagcaactctccaccatcgtcatcgaacgccccaagcccttctacacacacagc
gccggcaacaaggaccagccggatgtgtggttcgagccgcggcacgtgtgggaagtcaaa
acagccgacctgacactgtccccgcggtacaaggctgccgctgcagaagtcgggggtgga
ggcaagggtgtttccctgaggtttccccggttcatcaaagagcgagacgataagaaaccg
gaccaggcgtccagcgcgaggatgattgccgagatgtaccagaggcaggagagcgtgggg
aagaacaaggggccgagtgccgatgatgatttcgaatactaa

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