Ascochyta rabiei: EKO05_0008762
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Entry
EKO05_0008762 CDS
T09445
Name
(RefSeq) uncharacterized protein
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
arab
Ascochyta rabiei
Pathway
arab03022
Basal transcription factors
arab03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
arab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EKO05_0008762
09124 Replication and repair
03420 Nucleotide excision repair
EKO05_0008762
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
arab03021
]
EKO05_0008762
03400 DNA repair and recombination proteins [BR:
arab03400
]
EKO05_0008762
Transcription machinery [BR:
arab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EKO05_0008762
DNA repair and recombination proteins [BR:
arab03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EKO05_0008762
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ssl1
C1_4
VWA_2
VWA
Importin_rep_6
Tfb4
Motif
Other DBs
NCBI-GeneID:
62216955
NCBI-ProteinID:
XP_038796295
LinkDB
All DBs
Position
15:complement(1029324..1030877)
Genome browser
AA seq
517 aa
AA seq
DB search
MADSDYSYDGDEVSGDEFVGSRASSSRPAQPAGDGRQITKEPAPKPARKAWETEDSRTVE
KTIRPVDDEDMGQSVQEREEERKRKRLRKDTKPFQRGIIRHVVLVLDLSEAMMEKDMRPN
RFYTMINYAQDYVREFFEQNPISQMSVLGMHDGICIRVSELSGNPAEHAAAILGLRSKET
GKEPKGAPSLQNALELARATLYHTPNHGTREVIVVFGSLLSLDPGDIHQTVKACVRDRIR
VSIIGMGARLKICQEIVTRTNAGDEGEYTIATDQEMLKELLIATTTPPVIRSDTASTPQQ
PEKGAALMMMGFPSRVVEDVPTICACHGNLTLGGYTCSWCSAKVCSLPVTCPSCQLTLLL
STHLARSYHHLFPLRNWATVSWQRAREKNSRDCVGCLTTFPEILSKQELAARALKKERQS
TTGSILNGHTDRHNQRANGGHDDDDDDDDDDDEEENGDQKASESARYECRSCESHFCIDC
DMFCHMVLHNCPGCLSRLDPGAIANAGAQHGDVAMSG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggccgactcggactattcttacgacggggatgaggtttctggtgatgagtttgtagga
tctcgggccagctcaagcaggccagcgcagccagcaggcgacggaaggcaaatcacgaaa
gagccagcgcccaagccagcgcgcaaagcatgggagactgaagactcgcggactgtcgaa
aagaccataagacccgtcgacgatgaggacatgggacagagtgtgcaagaacgagaagag
gagcgcaagcgcaaacgattacgcaaagacacaaagccctttcaaagaggcattatacgg
cacgtcgttctggtgctggacctgtcagaggccatgatggagaaggacatgcgacccaat
cgcttctacacaatgattaactatgcacaagattacgtccgagaattctttgagcagaat
cccatttcccaaatgagcgtcctcggtatgcacgatggcatttgtatacgagtctccgag
ctttcaggcaacccagcagaacatgcagcagcaatactaggccttcgaagcaaggagacg
ggcaaagagcctaagggcgcacccagtcttcagaacgccctcgaactcgcgcgcgcaaca
ctataccacacgccaaaccacggcacacgagaagtcatcgtggtcttcggctccctcctt
tctctcgaccctggcgacatacaccaaactgtcaaggcatgtgttcgcgaccgcatccgt
gtcagtataataggcatgggcgcacgtctcaagatatgccaggagatagtaacacggaca
aatgctggcgatgagggtgaatacacaatcgcgacggatcaggagatgctcaaagagctc
ctcattgcaactaccaccccgcctgttatccgctcagataccgcctctacacctcagcag
cctgagaaaggtgctgcgctgatgatgatgggttttccttcgcgcgtcgtcgaagacgtg
cccacaatatgtgcatgccacggcaacctgacactcggcggctacacgtgttcgtggtgc
agtgcgaaagtgtgttctcttccagttacatgtcccagttgccaacttacactcctcctc
tcgacacatctggcccgcagctaccaccacctctttcccttgagaaactgggctactgtg
tcgtggcagcgtgcacgcgagaagaactcgagagactgcgtgggatgtctcactacgttt
cctgaaatcctatccaaacaggaactggctgcaagggcgctgaagaaggagaggcaatcc
acaactggcagcatattgaacgggcacacagacaggcataatcagagggccaatggtgga
catgacgatgatgatgatgatgatgatgatgatgatgaagaagaaaacggagaccaaaag
gccagcgagagtgcgagatacgagtgccgatcttgcgagagccatttctgtattgactgc
gacatgttctgccatatggttctacacaattgcccgggctgtttgagtagactggatccc
ggggcgatcgctaacgccggagcccagcatggagatgtagccatgagtgggtga
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