Ascochyta rabiei: EKO05_0010000
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Entry
EKO05_0010000 CDS
T09445
Name
(RefSeq) RNA helicase
Organism
arab
Ascochyta rabiei
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-GeneID:
62218416
NCBI-ProteinID:
XP_038794554
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All DBs
Position
18:join(496381..497121,497231..501901)
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AA seq
1803 aa
AA seq
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MAGDNSAVLSRMDTTDQILQWYSKLFSRRVDLVGDFAGSERFLIHGESLLLHCFSDAQID
FEPGLQLLHASYAVEKFLHGLVSRRCNFHIAFFDEYQDLCVPQDASPAVSEKYLLARAAI
IRHLQVNLRPVHPDIEVKVFPSSTSEAFEDYLSITDVYFILCHDGASTKDVRKRAILHKD
IDSLKSEDKSLGERQEQYKASLRTLIYTMMQRGYSAALVNGLEFNDTKAIASVLEHSRAM
TLAISQTTPTPDSNAETDTATLQQSLATVKSIHEHSFTEREYLAVLIASKFASKSKNHQN
FAVALLRHTALLSELSLPDRLMQYQEPSQESRTLILEFCQEARRVLAQAAWSQEISELAT
TCDVADLIDGRLFASCLQDPSAPSSELFQSLARAASTLCGQEELARADGAATATEKSNGN
AEKSDDGASYRLLPFSNEVFDKHLSPVHLKVAKSDGKVDSTSATIFREVSHWHNTKPLQS
KSGPVVKDEKAAKKALRRNQFFMAEMTTYAASLTNAVGKALEPETIMVGASKANTPVPSR
PGTPGQDSDSKKPKKQGGKPGGKNKNQAKQNMLADIAASSKRKEEDTAEKQIKAWIVVCD
GLEKEVDLTTRYEKAKKYLVNLNTDIKRKALEAEVRLYMLNVLLKMWMEHCRKNDKEEGL
YTAALIFDAVRAICGLSTVTKTVAACLTKTIDRLKLPSLQIPPTEGDRKLPFQLTLDDTS
SADIALSLSPEEFQLLYCGPYFDRTMDSAPDSRVSFEPDAWQRKVLDEIDARRSLLVVAP
TSAGKTFISFYAMQKVLESSNDDVLVYVAPTKALVNQIAAEVQARFSKNYKYANSVWGIH
TRDTRVNNPTGCQILVTVPHILQIMLLAPTNARSWSERVKWIIFDEVHCIGQAEDGLIWE
QLLLMAPCPIIALSATVGNAEAFSDWLSSTQKAAGNELTMVQHKHRYSDLRKFLYIPPKD
SAKRLAASLPLSANRTFARLGLDDVPNFTFMHPVASLTNRRRGMPSDFSLEARDCYFLWQ
SMSKHQTKEYPVDKSLTPSSVLPKVMRKADIIEWESGLKTLLAQWMADENSPFEAVRKDF
SSSVTKLALQIKDSDNAEPIQDDMEVDDPASNHDVDNILPLLTELHQQDALPGIIFNYDR
AVCERMCRTVLTQLEEAETEWKKTSPKWAEKLREWEEYKKEVARRAKQGVRAAKGTTKEE
QMMEAANREVSPFATFDPDRPLEGFHFANSKRLSSEELRNHEKELRYRGVDEIFIQGLQR
GIGVHHAGMNRKYRYAVEVLFRRGYLRVVIATGTLALGINMPCKTVVFSGDSIFLTALNY
RQAAGRAGRRGFDSLGNVVFHGISLSKINKLISSRLPDLNGHFPITTTLVLRLFTLLHDS
ENSPFAVRCINALLSQPRVYLGGEESKMTVLHHLRFSIEYLRRQSLLDSRGTPLNFAGAV
SHLYFTENSSFAFHALLKNGYFHELCAKVNTNQDSVLRELMLTMSHLFGRLHCRQADEEF
VQEVVKGSPSVVFLPNMPENAVSVLRKHNKQTLDIFTSYVRTFVEQHLQEADNTLPLTTT
KVGGKSNSFPSPIKVRSSFVALSGHNDEFESIHDLCTTSRSGIFLEEAVVPYVGIYPEDS
DLPLNAYLYDFFMHGNATAVVTANRIRRGDIWFVLNDFSMVLATIVTSLTNFMNLGTESD
LDFIDVRGGGDDEEEEQEDKLLPTGPGGDEATGPQSGAQGVRGPAQQQNLPIQLAKKKKK
VVESWDEEAESSSSDGENWDDGEDSDEEKGEVAWDEQTGLLNVLKAFKLLKADFDTKFRA
MWA
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggctggcgataattctgcggtcttgtcacggatggacactacagatcaaatcttacaa
tggtactccaaactcttcagtcgccgtgttgatcttgtgggcgacttcgcgggcagcgaa
cgattcttgattcatggtgagtcacttctgctccattgctttagcgatgcacagatcgac
ttcgaacctggactgcagctgctacacgcctcatatgccgtggaaaaattcctgcatggt
cttgtttcccgtcgttgcaactttcacattgctttcttcgacgaatatcaagatctttgc
gttcctcaagatgcttcgcctgccgttagcgaaaagtatcttctagcacgagcggccatc
atccgtcatctgcaagtcaacctgcgcccagttcacccagacatcgaggtcaaggtcttc
ccatcatcaacgtctgaagccttcgaagactacctcagtataacagacgtttacttcatc
ctgtgccacgatggagcatccacgaaagacgttcgtaagagagcaatcctgcacaaagat
atcgactctctcaagagcgaggacaagagtcttggggagcgtcaagagcaatacaaggca
tcactccgcacactgatctacactatgatgcagcgaggttacagtgctgcacttgttaac
ggcctggagttcaatgacaccaaggccatagcgtctgttctcgagcactcgcgtgctatg
accttagcgatctcacaaacgaccccaacaccagattcaaatgctgaaacagacactgca
actttacagcagtcattggcaactgttaagtcaatccatgagcattctttcacggagcgg
gagtacctggcggtacttatcgcttcgaagtttgcatcgaagtcaaagaaccaccaaaac
tttgctgttgctctgcttcgccatactgcactactctcggagctgagtttgccggaccga
ttgatgcagtaccaagagccatcgcaagaatcccgcaccttgattctcgagttttgtcaa
gaagctcgcagagttctcgcgcaagccgcgtggagccaagaaatcagtgagctagccacg
acttgcgatgttgcagatctcatcgacggacgcttgttcgcatcctgcctccaagacccc
tcggccccaagctcggagctcttccaatctttggcaagagctgcatccactctgtgtggt
caggaggagctcgcaagggcagacggtgctgcaaccgcgactgaaaagtctaacggcaac
gccgagaagtcagacgacggggcttcctaccgcctcctcccgttttctaacgaggtgttt
gacaagcacctttctccagtccatctcaaagtagccaaatctgacggtaaggtcgattcg
acatcggcaacgatctttcgcgaagtctcgcattggcacaataccaaacctctgcagagt
aaaagtggtcccgttgtgaaagacgagaaagcagcaaagaaagcactccgccgcaaccag
ttcttcatggctgaaatgacaacctatgctgctagtctcacgaatgcagtcggaaaggcg
cttgagccggagacaattatggtcggcgcctcaaaagccaacacaccagttccgtcgaga
ccgggaacgcctggccaagattcggatagcaagaagccaaagaagcaaggtgggaagcca
ggtggcaagaacaagaaccaggccaagcagaacatgctcgccgatattgcagcgagctcg
aagcgtaaagaggaggacacggcagagaaacaaatcaaagcctggattgttgtctgcgat
ggtctcgagaaggaagtcgacctgacaacgcgatacgagaaggcaaagaagtaccttgtc
aatctcaacacagacatcaagcgaaaggctctagaggcggaagttcgtctctacatgttg
aacgttctgttgaagatgtggatggaacactgtcgtaaaaacgacaaagaagagggtctg
tacaccgccgcgctgatcttcgatgcagtcagagctatctgtggtctttccaccgtaacg
aagacagtagccgcatgtcttacgaagaccatcgaccgtctaaagcttccttctttgcaa
attccaccaacagagggcgaccgaaagctgccgtttcaactcaccctggatgatacgtcg
agtgcggacatcgctctgagcctatcaccagaagagttccagctgctttattgtggaccg
tacttcgaccgaaccatggactcggctccggactctcgagtgtctttcgagccagatgcg
tggcaacggaaggttttggacgagatcgatgcccgccgcagtctgctcgtcgtagctccg
acttcagcgggtaaaacattcatctcgttctacgccatgcagaaggtcctagagtcaagt
aacgacgacgtcttggtgtacgtggctcccacaaaggcacttgtcaaccagatcgcagcc
gaagtacaagctcgcttctcaaagaactacaagtacgccaactcggtttggggtattcac
acacgtgacactcgtgtcaacaaccctaccggttgtcagatcctggtaacagtacctcac
attctccagattatgttgctcgcgcccaccaacgccagaagttggtccgagcgagtcaag
tggatcatcttcgatgaagtgcactgcatcggccaagctgaagacgggttgatctgggaa
cagctcctgcttatggcaccctgccccatcatcgctctttccgccaccgtcggaaacgct
gaggctttcagcgactggctctcttctacacaaaaagctgctggtaacgagttgaccatg
gttcagcacaagcaccgttactccgatctgcgaaagtttctgtacataccaccaaaggat
tcagcaaagcgtctcgcggcatcccttccgctgtcagcaaaccgtacatttgctcgtcta
ggcctggacgatgtacccaacttcaccttcatgcatcctgtcgccagtcttaccaaccga
aggcgtggtatgccaagtgacttctcgttagaagcacgagactgttacttcctctggcaa
agcatgtccaagcaccagaccaaggaatatccagtcgacaagtctcttaccccttcaagt
gtgcttcctaaggttatgcgcaaggctgacatcattgaatgggaatcgggactcaagact
ctgctcgctcagtggatggcagatgaaaactctccattcgaagctgtacgaaaggacttc
agctcctccgtcacaaaattggctcttcagatcaaggacagtgataacgcagagccaatt
caagatgacatggaagtcgatgacccagcgagcaaccacgatgttgacaatatcctgcct
ctgttgacagagctgcatcagcaagatgctcttccaggtatcatcttcaactacgatcga
gccgtctgcgagaggatgtgccgtaccgtcttaacccagctggaagaggccgagaccgag
tggaagaagaccagcccgaagtgggcagaaaagttgcgtgagtgggaagagtacaagaag
gaggttgcccgccgtgccaagcaaggtgttcgcgccgcgaagggtactacgaaggaagag
cagatgatggaggctgccaatcgcgaggtcagcccctttgcgaccttcgatccagatagg
ccattggagggtttccactttgcgaacagcaagagactgtccagtgaggaactccgtaac
cacgagaaggagctccgataccgcggcgttgacgagatatttatccaaggcctgcagcgt
ggtattggtgttcatcacgctggtatgaaccgtaagtaccgctacgccgtcgaagtgctg
ttcaggagaggctacctgagggttgtcatcgcgacgggtacccttgcccttggtatcaac
atgccctgtaagactgttgtcttctctggcgactccattttcctgacggctctcaactac
cgccaagccgctggtcgtgcgggtcgccgtggattcgactcgcttggtaacgttgtcttc
catggcatctcactcagcaagatcaacaagctcatcagctctcgtctacctgatctcaac
ggacacttcccaatcaccacaactctggtgctacgcttgttcacactcttgcacgactct
gagaactcgccgttcgccgtccggtgtatcaacgcgttgttgtctcagcctcgtgtgtac
cttggtggcgaggagtcgaagatgactgttctgcaccatctacgcttctctatcgagtat
ttgcgcaggcaatcgctgttggactctcgaggaacgccactcaattttgcaggtgctgtt
agtcatctgtactttaccgaaaattcttctttcgccttccacgcactgctgaagaatgga
tacttccacgagttgtgcgcgaaggtgaacacaaaccaggactcggtcttgcgcgagctc
atgctcactatgtcccacctctttggccgccttcactgcagacaagccgatgaggagttt
gtgcaggaagtagtcaagggcagtccgtcagttgtgttcctacccaacatgcccgaaaac
gcagtcagtgtcctgcgcaagcacaacaaacaaacattggacatattcacatcctacgtc
cgcacctttgttgagcagcacctccaggaggctgacaacactctccccttgaccacgact
aaggttggtggcaagtcaaattcattcccctcgcccatcaaggtgcggtcttccttcgtc
gcgctctcaggccacaacgatgagttcgagtctattcacgatctctgcaccacaagcagg
tccggaatcttccttgaagaagctgtggtaccgtatgtcggcatctacccagaagactct
gacttgcccctcaatgcctacctgtacgacttcttcatgcatggcaacgccaccgctgtt
gtcacagcaaataggatccgccgcggagacatttggttcgtactcaacgacttcagtatg
gtgcttgcaaccatcgtcaccagcttgaccaacttcatgaacctcggcactgaatctgac
cttgacttcatcgacgtgcgcggtggaggagatgacgaggaggaggagcaggaggacaag
ctcctgcccactggacctggtggggatgaagctacaggacctcaatctggtgcgcaaggc
gtcaggggccctgcgcagcagcagaaccttcccatccagcttgcgaagaaaaagaagaag
gtcgttgagtcctgggacgaagaggcagagagctcgagtagtgacggcgagaactgggac
gatggggaggacagcgacgaggagaagggcgaggttgcttgggatgagcagactggattg
ttgaacgtgctcaaggcgttcaagctcttaaaagcggactttgacacgaagttcagggct
atgtgggcttag
DBGET
integrated database retrieval system
