Amycolatopsis rhabdoformis: VSH64_02435
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Entry
VSH64_02435 CDS
T09694
Symbol
dxs
Name
(GenBank) 1-deoxy-D-xylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00730
Thiamine metabolism
arhd00900
Terpenoid backbone biosynthesis
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
Module
arhd_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
VSH64_02435 (dxs)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
VSH64_02435 (dxs)
Enzymes [BR:
arhd01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
VSH64_02435 (dxs)
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Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
PFOR_II
E1_dh
TPP_enzyme_C
Motif
Other DBs
NCBI-ProteinID:
WSE30989
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Position
518835..520754
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AA seq
639 aa
AA seq
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MTMLDSVHGPADLKRMSVEDLDELAAEIRDFLVEKVRRSGGHLGPNLGVVELTLALHRVF
DSPRDAIVWDVGHQAYVHKIVTGRHAEFDKLRQLGGPTGYPSRAESEHDLVENSHASTAL
SYVDGLAKAFELSGGAPRHAIAVVGDGALTGGMCWEALNNIAANRDRPVVIVINDNGRSY
SPTIGGLADHLAALRLQPGYERLLDGGREILRNTPVVGKPIYAALHAAKAGIKDALSPQV
MFSDLGLKYLGPVDGHDLVALEKALQSARAFGGAVIVHVVTEKGHGYAPAVNHQADQMHQ
TDPIDPETGLPPVKGPSWTGVFGDELAKIGAEREDVVAITAAMLRSTGLEKFSEKFPDRW
FDVGIAEQHAVTSAAGLAMGGYHPVVAVYSTFLNRAFDQVLMDVALHRQPVTFVLDRAGI
TGPDGPSHHGMWDLSLLGMVPGMRVAAPRDPGSLREELREAVAVADGPTALRFSKGSVGA
DLPAVERLGTVDVLRRPRDSCTTDVLLVAVGSFGKLGLAAADRLADQGIGVTVVDPRWVV
PVPAELVALAEQHKLVVTVEDSGRHGGFGSALAAVLRDADCDVPLRDLAVPQSFHDHGSR
DEVLDRVGLTAQDVARRITEWASGRLGVAQDVPAENPRG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
gtgacgatgctggactccgtgcacggaccggcggacctgaagcgcatgagcgtcgaggac
ctcgacgagctggccgccgagatcagggatttcctcgtcgagaaggtgcggcggtccggg
ggccacctcggtccgaacctgggtgtcgtggagctcacgctcgcgctgcaccgggtgttc
gattcaccacgcgacgcgatcgtgtgggacgtcggtcaccaggcgtacgtgcacaagatc
gtgaccggccggcacgccgagttcgacaagctgcgccagctcggcgggcccacggggtac
ccctcgcgggccgagagcgagcacgacctggtggagaacagccacgcctccaccgcgctg
tcctatgtggacggcttggcgaaggcgttcgagctgtccgggggcgccccgcgccacgcg
atcgcggtggtcggcgacggcgcgctcaccggcggcatgtgctgggaagcgctcaacaac
atcgcggcgaaccgcgaccggccggtcgtgatcgtgatcaacgacaacggccgctcgtac
tcgccgaccatcggcggcctcgccgaccacctcgcggcgctgcgcctgcagcccggctac
gaacgcctgctcgacggcggccgcgagatcctgcgcaacacgccggtggtgggcaagccg
atctacgccgcgctgcacgccgcgaaggccggcatcaaggacgcgctgagcccgcaggtg
atgttctccgacctgggcctgaagtacctcggcccggtcgacggccacgacctcgtggcg
ctggagaaggcgctgcagagcgcccgcgcgttcggcggcgccgtgatcgtgcacgtggtc
accgagaagggccacggctacgcgcccgcggtgaaccaccaggccgaccagatgcaccag
accgacccgatcgacccggagaccggcctgccgcccgtgaagggccccagctggaccggc
gtgttcggcgacgaactggccaagatcggcgccgagcgcgaggacgtggtggccatcacc
gcggccatgctgcgctccaccggcctggagaagttctccgagaagttcccggaccgctgg
ttcgacgtcggcatcgccgagcagcacgccgtcacgtcggcggcgggcctcgcgatgggt
gggtaccacccggtggtggcggtctactccacgttcctcaaccgcgcgttcgaccaggtc
ctgatggacgtcgccctgcaccgccagccggtgacgttcgtgctcgaccgcgccggcatc
accggccccgacggccccagccaccacggcatgtgggacctctcgctgctcggcatggtg
cccggcatgcgcgtggccgccccccgcgacccgggctcgctgcgcgaggaactgcgcgag
gccgtggccgtcgccgacggcccgacggccctgcgcttctcgaagggcagcgtcggcgcc
gacctgcccgccgtcgaacgcctcggcacggtcgacgtcctgcgccgcccgcgcgactcc
tgcaccaccgacgtgctcctcgtcgccgtcggctcgttcggcaagctgggcctcgcggcc
gccgaccgcctcgccgaccagggcatcggcgtcacggtcgtggacccccgctgggtcgtc
cccgtgccggccgaactggtcgccctggcggaacagcacaagctcgtggtcaccgtcgag
gacagcggccgccacggcggcttcggctccgccctggcggcagtcctgcgcgacgcggac
tgcgatgtgccgctgcgtgacctggcggtgccgcagagcttccacgaccacggttcacgc
gacgaggtgctggaccgggtgggcctgaccgcccaggacgtggcgcggcgcatcacggag
tgggcgtccgggcggctgggtgtggcgcaggatgtgccggcggagaatccgcggggctga
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