Amycolatopsis rhabdoformis: VSH64_15110
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Entry
VSH64_15110 CDS
T09694
Name
(GenBank) biotin carboxylase N-terminal domain-containing protein
KO
K11263
acetyl-CoA/propionyl-CoA carboxylase, biotin carboxylase, biotin carboxyl carrier protein [EC:
6.4.1.2
6.4.1.3
6.3.4.14
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00061
Fatty acid biosynthesis
arhd00280
Valine, leucine and isoleucine degradation
arhd00620
Pyruvate metabolism
arhd00630
Glyoxylate and dicarboxylate metabolism
arhd00640
Propanoate metabolism
arhd01100
Metabolic pathways
arhd01110
Biosynthesis of secondary metabolites
arhd01120
Microbial metabolism in diverse environments
arhd01200
Carbon metabolism
arhd01212
Fatty acid metabolism
Module
arhd_M00741
Propanoyl-CoA metabolism, propanoyl-CoA => succinyl-CoA
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00620 Pyruvate metabolism
VSH64_15110
00630 Glyoxylate and dicarboxylate metabolism
VSH64_15110
00640 Propanoate metabolism
VSH64_15110
09103 Lipid metabolism
00061 Fatty acid biosynthesis
VSH64_15110
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VSH64_15110
Enzymes [BR:
arhd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.14 biotin carboxylase
VSH64_15110
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.2 acetyl-CoA carboxylase
VSH64_15110
6.4.1.3 propionyl-CoA carboxylase
VSH64_15110
BRITE hierarchy
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
ATP-grasp
Biotin_lipoyl_2
Dala_Dala_lig_C
DUF2118
ATP-grasp_5
ATP-grasp_3
RnfC_N
Motif
Other DBs
NCBI-ProteinID:
WSE35147
LinkDB
All DBs
Position
complement(3333451..3335199)
Genome browser
AA seq
582 aa
AA seq
DB search
MPAKVFTKVLVANRGEIAVRVIRAARDAGLASVAVYADPDAHAPHTRLADEAYALHGTTA
AESYLDIDKILDVAKVSGADAVHPGYGFLSENAAFAQAVLDAGLVWIGPGPQAIRDLGDK
VTARKIARSVGAPLVPGTEEPVASADEVVAFADEHGLPVAIKAAFGGGGRGLKVARTREE
IPELFDSATREAVAAFGRGECFVERYLDRPRHVEAQVLADAHGTVVLAGTRDCSLQRRHQ
KLVEEAPAPFLTDEQHELIRSSAKRICAAAGYLGAGTVEYLVGTDGTISFLEVNTRLQVE
HPVTEETTGLDLVLEQFRIARGERLDPADPEPRGHAFEFRVNGEDPGRGFLPMPGTVRRF
DVPEGPGIRLDSGVEAGTVVGGQFDSMLAKLIVSGPDRATALARSRRALAELTVEGLATV
VPFHRAVVRDPAFTAETGFGVHTRWIEEDFVNDLPEYSAEPADDGKVTISVGGRALRVAL
PGLSEVGSRAEEIRAASAAVALGPRASAVSGDAVTTPMQGTVVKLAVAEGDSVEIGDLIA
VVEAMKMENPVKAHKAGVVTGLAVAVGDSRAQGEVLCEIREP
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
gtgccggccaaggtgttcaccaaggtgctggtggccaaccgcggcgagatcgccgtgcgc
gtgatccgcgccgcgcgtgacgccgggctggcgtcggtcgccgtgtacgccgacccggat
gcccacgcgccgcacacgcgcctggccgacgaggcgtacgcgctgcacggcaccaccgcc
gccgagtcctatttggacatcgacaagatcctcgacgtcgccaaggtgagcggcgccgac
gccgtgcaccccggctacgggttcctctcggagaacgccgccttcgcccaggccgtgctc
gacgccggcctggtgtggatcggccccggcccgcaggcgatccgcgacctgggtgacaag
gtcacggcccgcaagatcgcccggtccgtgggcgcgccgctggtgccgggcaccgaggag
ccggtggcctcggccgacgaggtcgtggcgttcgccgacgagcacggcctgccggtggcg
atcaaggccgcgttcggcggcggcggccgcggcctgaaggtggcccgcacgcgcgaggag
atccccgagctgttcgactcggccacgcgcgaagcggtggcggcgttcggccgcggcgag
tgtttcgtggagcgctacctcgaccggccgcgccacgtcgaggcgcaggtgctcgccgac
gcgcacggcacggtcgtgctggccggcacgcgcgactgttcgctgcagcggcgccaccag
aagctcgtggaggaggctccggcgccgttcctcaccgacgagcagcacgagctgatccgc
tcgtcggccaaacggatctgcgcggcggccggctacctcggcgcgggcacggtggagtac
ctcgtgggcaccgacggcacgatctccttcctcgaggtcaacacccgcctgcaggtggag
cacccggtgaccgaggagacgaccggcctcgacctggtgctggagcagttccgcatcgcg
cgcggcgaacggctcgacccggcggaccccgagccccgcgggcacgcgttcgagttccgc
gtcaacggtgaggacccgggccgcggcttcctgccgatgccgggcaccgtgcgccgcttc
gacgtgccggaagggccgggcatccgcctcgactccggcgtcgaggccggcacggtcgtg
ggtggacagttcgactccatgctggcgaagctgatcgtgtccgggcccgaccgcgccacg
gcgctggcccgcagccgccgcgcgctggccgagctcacggtggagggcctcgcgaccgtg
gtgccgttccaccgggccgtggtgcgggatccggcgttcaccgccgagaccgggttcggt
gtgcacacgcgctggatcgaagaagacttcgtgaacgacctgccggagtactcggccgaa
cccgccgacgacggcaaggtgacgatctccgtcggcggccgcgccctgcgcgtggccctg
cccggactgtccgaagtgggcagccgggccgaggagatccgcgcggcttcggcggccgtg
gcgctcgggccgcgcgcgagcgcggtgtcgggtgacgcggtgaccacgccgatgcagggc
acggtcgtgaagctcgcggtggccgaaggcgactccgtggagatcggtgatctcatcgcc
gtggtcgaggcgatgaagatggaaaacccggtgaaggcgcacaaggccggcgtggtgacc
gggctcgcggtggcggtcggcgacagccgggcgcagggtgaggtgctgtgcgagatccgc
gagccgtag
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