Amycolatopsis rhabdoformis: VSH64_19340
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Entry
VSH64_19340 CDS
T09694
Name
(GenBank) biotin carboxylase N-terminal domain-containing protein
KO
K01968
3-methylcrotonyl-CoA carboxylase alpha subunit [EC:
6.4.1.4
]
Organism
arhd
Amycolatopsis rhabdoformis
Pathway
arhd00280
Valine, leucine and isoleucine degradation
arhd01100
Metabolic pathways
Module
arhd_M00036
Leucine degradation, leucine => acetoacetate + acetyl-CoA
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09100 Metabolism
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
VSH64_19340
Enzymes [BR:
arhd01000
]
6. Ligases
6.4 Forming carbon-carbon bonds
6.4.1 Ligases that form carbon-carbon bonds (only sub-subclass identified to date)
6.4.1.4 methylcrotonoyl-CoA carboxylase
VSH64_19340
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
Biotin_carb_N
Biotin_carb_C
Biotin_lipoyl
Dala_Dala_lig_C
ATP-grasp
Biotin_lipoyl_2
ATP-grasp_5
HlyD_3
ATP-grasp_3
ATP-grasp_2
Motif
Other DBs
NCBI-ProteinID:
WSE34229
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Position
4250561..4252318
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AA seq
585 aa
AA seq
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MPEGTVLVANRGEIAVRIIRACRELGLRSVAVYSDADAGALHVRLADESHRIGPPPARAS
YLDIDAVLGAAKATGANLVHPGYGLLSEDAGFAEAVTAAGLTFVGPSAEVIARMGDKVAA
REVAEACGVPVPPGTGDLTAEAAPAAAERIGFPLVVKASFGGGGRGMRVVTAAAELADAM
ASAAREAEAAFGRAEVHLERYLAPVRHVEVQVLADSHGRVLHLADRDCSVQRRHQKLIEE
APAFGLPDSLRAALRQAAVKLAREVGYVGAGTVEFLVLPATGEFFFLEMNTRLQVEHGVT
ELVTGLDLVATQLRVALGEPLPFTQEDVVVRGHAIQARIAAEDPAAGFRPAPGPVADLAV
PTGPGIRADFGVEAGDAVPAMYDSLFGKVLAHGHDRDSARRRLIGALGELRVAGPPTTAA
YLRTILGSALFAEGRHDTGSVERDWVPDATEAAPAPTPSAPAAPGAVPVRRVRIATDRGP
VEIAIHGRAARPGVVTGASSRPAREGGASAATASAGGPPTAPMDATVVAVRVEPGQEIAA
GEVVVVLEAMKMEMQVRAEVGGVVGSVLVSPGASVTAGTPLITLD
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgccagagggaaccgtcctcgtggcgaaccgcggtgagatcgccgttcgcatcatccgc
gcgtgccgcgagctcggcctgcggtccgtcgccgtgtacagcgacgccgacgccggcgcc
ctgcacgtgcggctcgccgacgagagccaccgcatcggcccgccgcccgcccgcgcgtcc
tatctggacatcgacgcggtgctgggcgcggcgaaggcgaccggcgcgaacctcgtgcac
ccgggctacggcctgctcagcgaggacgccgggttcgccgaagcggtcacggcggccggg
ctcacgttcgtcgggccgtcggccgaggtcatcgcgcgcatgggcgacaaggtcgcggcg
cgcgaagtggccgaagcgtgcggtgtgccggtgccgccgggcaccggtgatctcacggcc
gaagcggctcccgccgcggccgagcgcatcggatttccgttggtggtcaaggcttcgttc
ggcggtggcgggcgcggcatgcgtgtggtgaccgccgctgccgagctcgccgacgcgatg
gcctcggccgcgcgggaagccgaagcagcgttcggccgggcggaggtgcacctcgagcgc
tacctcgcgccggtgcgccacgtcgaggtgcaggtgctcgccgacagccacggccgcgtt
ctccacctggccgaccgcgactgctcggtgcagcgccggcaccagaagctcatcgaggag
gcgccggcgttcggcctgccggactcgctgcgggccgcgctgcgccaagcggcggtgaag
ctcgcgcgcgaggtcgggtacgtcggcgccggcaccgtcgagttcctcgtgctgcccgcg
accggcgagttcttcttcctggagatgaacacgcgcctgcaggtcgagcacggcgtgacc
gagctggtgaccggcctcgatctcgtggcgacgcagctgcgcgtggcgctcggcgagccg
ctgccgttcacgcaggaggacgtggtggtgcgcgggcacgcgatccaggcgcgcatcgcg
gccgaggacccggccgcgggtttccggccggccccgggcccggtggcggacctggccgtg
cccaccggccccggcatccgcgccgacttcggcgtcgaggccggcgatgcggtgcccgcg
atgtacgactcgctgttcggcaaggtcctcgcccacggccacgaccgcgactccgcccgg
cggcggctcatcggtgcgctgggcgagctgcgggtcgcgggtccgcccaccacggcggcg
tacctgcgcacgatcctcggctcggcgttgttcgccgaaggccggcacgacacgggttcg
gtcgagcgggactgggtaccggacgcgaccgaagcggctcccgcgccgacgccctcggcc
cccgctgccccgggcgcggtgcccgtgcggcgagtccgcatcgcgaccgaccgcgggccg
gtggagatcgcgatccacggccgcgccgcgcgtcccggcgttgtcaccggagcttcttcg
cgccctgcgcgcgagggtggggcgagcgcggccaccgcgtcggccggcgggccgccgacg
gcgccgatggacgccaccgtggtcgccgtgcgggtcgaacccgggcaggagatcgccgcg
ggcgaggtcgtcgtggtgctggaggcgatgaagatggagatgcaggtgcgcgcggaggtg
ggcggggtcgtcggctccgtcctggtctcccccggcgcctcggtgaccgccggaacgccg
ctgatcacgctcgattag
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