Amycolatopsis rhabdoformis: VSH64_21680
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Entry
VSH64_21680 CDS
T09694
Symbol
selB
Name
(GenBank) selenocysteine-specific translation elongation factor
KO
K03833
selenocysteine-specific elongation factor
Organism
arhd
Amycolatopsis rhabdoformis
Brite
KEGG Orthology (KO) [BR:
arhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
arhd03012
]
VSH64_21680 (selB)
Translation factors [BR:
arhd03012
]
Eukaryotic type
Elongation factors
VSH64_21680 (selB)
Prokaryotic type
VSH64_21680 (selB)
BRITE hierarchy
Motif
Pfam:
GTP_EFTU
SelB-wing_3
GTP_EFTU_D2
MMR_HSR1
FeoB_N
Motif
Other DBs
NCBI-ProteinID:
WSE34657
LinkDB
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Position
complement(4776650..4778410)
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AA seq
586 aa
AA seq
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MRVIATAGHVDHGKSTLIRGLTGMEPDRWAEERRRGLTLDLGFAWTRFGDEELAFVDVPG
HRRFVPNMLAGIGPVPAALFVVAADEGWMPQSAEHLAALDAFGVRHGLLAVTKADRADPA
AATAQALGELAATSLGAVPAVSVSGTTGAGLDELRARLTALAGGLPAPDPDADVRLWIDR
AFTIRGAGTVVTGTLGAGTLRVGDELVLGAERVQVRGLQALGEPHESVPAVARVAVNLRG
VARDAAERGDALLTPGVWRTTAELDVRLRGSPTADLHRHLVVHLGSAAVPARIRPLGPDT
VRLLLATPLPLRVGDRGLLRDPGEHRIPAGFDVLDVRPPALARRGAARARGVELATPEPG
WDHLRRAGFVRHEDFRALGLPEVGERLGDWHADPAHLARLREDVPAVVAEWSGEHPIAAG
MPVDVLRRRLGLPAADLVPAVLTGDLVTADGLVRRPGAGLAAGVAEALSVLEAGFAEHPF
RAPEADDLRELGLGNRELAAAVRLGRLSAVADGVVLGPDAPRRAVEILATLGKPFTVSEA
RRALDSTRRVTVPLLEHLDAAGLTVRQDDSTRRVAGPATTPVSPGS
NT seq
1761 nt
NT seq
+upstream
nt +downstream
nt
atgcgggtgatcgccacggccgggcacgtcgaccacgggaagtccacgctgatccgcggg
ctcaccggcatggagccggaccggtgggcggaggaacgccgccgcggcctcacgctcgac
ctcggtttcgcctggacacgcttcggcgacgaggagctcgcgttcgtggacgtgcccggc
caccggcggttcgtgccgaacatgctcgcgggcatcggcccggtgcccgccgcgttgttc
gtggtcgcggccgacgagggctggatgccgcagtcggccgagcacctggccgcgctcgac
gcgttcggcgtgcgccacggcctgctcgccgtgaccaaggccgaccgcgcggacccggcg
gccgccacggctcaggcgctgggggagcttgccgcgacctcgctcggtgcggtgccggcg
gtgagcgtgagcggcacgaccggtgccgggctcgacgagctgcgggcccggctgaccgcg
ctggccggtggcctgccggccccggatccggacgccgacgtgcggctctggatcgaccgg
gccttcacgatcaggggcgccggcaccgtcgtcaccggaaccctcggcgcgggcacgctg
cgcgtcggcgacgagctggtgctcggggcggagcgggtgcaggtccgcgggctgcaggcg
ctgggggagccgcacgagagcgtgccggccgtcgcccgggtcgcggtgaacctgcgcggc
gtcgcgcgggacgcggccgagcgcggcgacgcgctgctcacccccggcgtgtggcgcacc
accgccgagctcgacgtccgcttgcggggctcgcccaccgccgacctgcaccggcacctg
gtggtgcacctcggttccgcggccgtgcccgcgcggatccggccgctggggccggacacg
gtccggctgctgctcgcgaccccgctgccgctgcgggtgggggaccggggtctgctgcgc
gatcccggggagcaccggatcccggccgggttcgacgtgctcgacgtccggccgccggcg
ctggcccgccgcggagccgcccgcgcccgcggcgtggagctggcgacgccggagccgggc
tgggatcacctgcggcgcgcaggtttcgtgcgccacgaggacttccgcgcgctcggcctg
ccggaggtcggtgagcgtctcggcgactggcacgccgaccccgcgcacctcgcgcggctg
cgcgaggacgtgccggcggtggtcgccgaatggtccggcgagcacccgatcgccgcgggg
atgccggtcgacgtgctgcgccgacggctcgggctgccggccgcggacctggtgccggcg
gtgctgaccggggacctggtcacggccgacggtctcgtccgccggcccggcgcgggcctg
gccgccggtgtggccgaggccctcagcgtgctcgaagcgggtttcgccgagcacccgttc
cgggcgccggaagcggacgatctgcgcgaactcggcctgggcaaccgggaactcgccgcc
gccgtgcggctcggccgcctcagcgccgtggccgacggggtggtgctgggtcccgacgcg
ccgcgccgggcggtggaaatcctggccacgctgggcaaaccgttcaccgtgtccgaagcc
cggcgcgccctcgacagcacgcggcgcgtcacggtgccgctgctggaacacctcgacgcc
gcggggttgaccgtgcgccaggacgacagcacccgccgggtcgccggtccggcaaccacg
ccggtttcgcccggttcatag
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