Acinetobacter radioresistens: DOM24_01340
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Entry
DOM24_01340 CDS
T05620
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
arj
Acinetobacter radioresistens
Pathway
arj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
arj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
DOM24_01340 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
arj03019
]
DOM24_01340 (pnp)
03016 Transfer RNA biogenesis [BR:
arj03016
]
DOM24_01340 (pnp)
Enzymes [BR:
arj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
DOM24_01340 (pnp)
Messenger RNA biogenesis [BR:
arj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
DOM24_01340 (pnp)
Transfer RNA biogenesis [BR:
arj03016
]
Prokaryotic type
tRNA degradation factors
DOM24_01340 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
S1
KH_1
KH_2
S1_2
Motif
Other DBs
NCBI-ProteinID:
AWV85289
LinkDB
All DBs
Position
298661..300760
Genome browser
AA seq
699 aa
AA seq
DB search
MSMFNIVRKEFQFGQHQVVLETGRVARQANSVLITMGGVSVLVAVVAQPTAKAGQDFFPL
TVNYQEKQYAAGRIPGGYGKREGRASEAETLISRLIDRPIRPLFPEGYYNEIQVTATVVS
SDKTMDADIAAMLGTSAALSIAGTPFRGPIAGARVGLINGEYILNPNHEQLKESDLDLVV
AGTETAVLMVESEAKELSEDQMLGAVLFGHDEMQIAIQAIKEFAAAAGATDSTWVAPTKN
DALLEQLKTAFEAKISEAYTIAVKQERYAALDALHAEAIAQFVPENDETGIADEVNELFE
ELKYRTVRDNILSGKPRIDGRDTKTVRALDVQVGVLERAHGSALFTRGETQALVTATLGN
TRDALMVDTLSGTKTDNFMLHYNFPAYSVGETGRESGPKRREIGHGRLARRGVQAVLPPV
DRFPYVLRVVSDITESNGSSSMASVCGASLALMDAGVPLKAPVAGIAMGLVKEGERFAVL
SDILGDEDHLGDMDFKVAGSANGITALQMDIKIEGITEEIMEVALNQAFTGRMHILNEMN
KVISRARPEISMHAPTFAVITINPDKIRDVIGKGGATIRQITEETKAAIDIEDNGTVRVF
GETKAAANAAIAKIQALTAEVEPGKIYDGKVIRIVEFGAFVNIMPGTDGLLHISQISNER
IANVTDVLKEGQEVKVQVADVDNRGRIKLTMKDIEQTSN
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atgtcgatgtttaacattgtccgtaaagaatttcaatttggtcagcatcaggttgtactg
gaaactggccgtgtagcacgtcaggcgaattccgtgctgatcactatgggtggtgtttct
gtactggttgctgtagttgctcaaccgactgccaaagctggtcaggacttttttccactg
actgtaaactatcaagaaaaacaatatgctgctggtcgtatcccgggcggctacggtaaa
cgcgaaggccgtgcatctgaagctgaaactctgatctcacgtctgatcgaccgtccaatt
cgtccattgtttccagaaggttactacaacgaaattcaggtaactgcgaccgttgtttct
tctgacaagaccatggatgccgatattgctgccatgctgggtacttcagctgcgttgtca
attgccggtacaccatttcgtggcccaatcgctggcgcacgtgttggtttaattaacggc
gaatatattcttaacccgaaccatgaacagttaaaagaaagtgatcttgaccttgtggtt
gctggtactgaaactgcggtactgatggtggagtctgaagccaaagagctttcagaagac
cagatgctgggcgcagtactcttcggtcatgatgaaatgcagattgctattcaggcaatt
aaagaatttgcagcagcagcaggcgcaactgactcaacttgggttgcacctactaaaaat
gatgcactgcttgaacagctaaaaactgcttttgaagctaaaatctctgaagcatataca
attgctgtaaaacaggagcgttatgcagctcttgatgccttacatgctgaagctattgca
cagtttgttcctgaaaatgacgagactggtattgctgacgaagtaaacgaactgttcgaa
gagctgaaatatcgtaccgtacgtgacaatatcctgtcaggtaaaccacgtatcgatggt
cgtgacactaagactgtacgtgcacttgatgtacaggttggcgtactggaacgtgctcac
ggttcagcattgtttacccgtggtgaaactcaggctctggttactgcaacactgggtaat
acccgtgatgcgttgatggttgatacactgtcagggaccaaaactgacaacttcatgctg
cactataatttcccggcgtattcagtaggtgagactggccgtgaatctggtcctaaacgt
cgtgaaattggtcacggacgtctggcgcgtcgtggtgtacaggctgtacttccaccagtt
gaccgcttcccgtatgttctacgtgtagtatctgatattaccgagtcaaacggttcatct
tctatggcttctgtctgtggtgcttcacttgcactgatggatgcaggcgtaccattaaaa
gctccagttgcaggtattgcaatgggtctggttaaagaaggagagcgtttcgccgtactt
tctgacatcttgggtgatgaagatcatctgggtgacatggactttaaagtagccggttct
gctaatggtattactgcccttcagatggatattaaaatcgaaggtattactgaagagatc
atggaagttgccctgaatcaggcatttactggtcgtatgcatattttgaatgaaatgaat
aaagtcatttctcgtgctcgtcctgaaattagtatgcatgccccaacatttgctgtgatt
acaattaatccagacaagattcgtgatgttattggtaagggcggcgcgacaattcgtcag
attactgaagaaactaaagctgcaattgatattgaagataatggtaccgttcgtgttttc
ggtgaaactaaagctgctgcgaacgctgcaattgccaagattcaggccctaactgctgag
gttgagccaggcaagatctacgacggtaaagttatccgtattgttgaatttggtgcattt
gtaaatatcatgccaggtactgatggtctgttacatatttcacaaatttcaaatgagcgt
attgctaacgtgactgatgttcttaaagaaggtcaggaagtgaaagttcaggttgctgat
gtagataaccgtggccgtattaaactgacgatgaaagatattgaacaaacttctaactaa
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