Arthrobacter sp. LS16: AFL94_11235
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Entry
AFL94_11235 CDS
T04078
Name
(GenBank) ATP-dependent DNA helicase
Organism
arl
Arthrobacter sp. LS16
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
UvrD-helicase
UvrD_C
AAA_19
DEAD
AAA_25
AAA_30
AAA_7
PAH
T2SSE
Motif
Other DBs
NCBI-ProteinID:
ALD64393
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Position
complement(2450691..2453891)
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AA seq
1066 aa
AA seq
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MSMHDVPAEESAPLLETLAGARTPMLVAGAPGTGKTTALIDTAVARLDDGLDPLSLLVIA
PTRLSAAAIRDELSRRAQRTFTEPVVRTWSAYAFDLIRRARVEGLLPFVERAPRLLSGPE
QDTLIGNLLEGHAQGLTPGPGWPADLELAVETRGFRKELREFFDRVSELGLDPADIADYG
QAAARPEWLAAARFYQEYRDLLDLGNAEAFDPAGLITRAAQLLEENPDFLHAEQDRLALI
LVDDLQEATLSQHRLLALLGRDRPLLAFAAPDSVVQGFRGARADQLHRFSARYTSADDAQ
ILELGTGYRMGPEITEAWRRIVRRIPVATGTRGRAVEPVAAAGAGAAQALTFENSTLEER
FIAQRIVQLNLFEGKDLSDIAIVVRNGSQVRSLSRFLEGQGIAVQVPPAEIPLKDESAVR
PLLDLLDLAFADGAGEDPLLMQNLLLSRYGMSTALEIRRLRQLLRQQESSRGGRRSSQEL
LEACLTEPELAADLGKPAFGLQRLLKMYTALREELASGTATPETALWVMWEASGRAKAWR
EEALGAGTTARRADHDLDAVLSLFQAAERFVDQLPGASVEQFIEHILHQELPMDSLASRG
SGGQHVTVLTTAAAAGKQWPIVFIPGLQEGSWPNLRLRGELLGSNALADVVEHGIGFLAT
RTPTHLVRQIRSDELRSFSNAVSRASSQLICTAVDNEDSQPSSFMDLVDPPGDEGRAPTP
VPRIRALPALVAELRNTAERAKAAQLGAIAPPPQVSADDLYRDAAQVLSGLAAQPRTVRG
AHPSSWWGMLPLSSHGPVIPEGQPRRISPSKVETLVKSPLNWFVQSAGGTAAHDFAASLG
TLIHSIAEEHPEASSSEYERILEERWPELEKPENWEGQRDFDRANSMLKKFAQYCVASRQ
EGRRLVARELPFNVEVPTGGDPVQIRGIIDRVEADANGRVTVVDLKTGASAPSKNDVLEH
AQLGVYQTAIQLGALQEHEQTAGLSDDPAGATLVYVGTSAKSPALRDQPALGQEDWARKL
ILEAAELMGHTEFTTRHVAGSAGLLGSCTLPEICPLCNEGRQVTEP
NT seq
3201 nt
NT seq
+upstream
nt +downstream
nt
atgagtatgcacgacgtacctgccgaggaatcggccccgctgctggaaaccctggccggc
gcacgaacccccatgctggtcgccggtgcccccggcaccggcaagaccaccgcgctcatc
gacaccgcggtggcccgcctggacgacggtctggacccgctctcgctgctggtcatcgcg
cccacccggctgagcgccgcggccatccgcgacgagctcagccgccgcgcccagcgcacc
ttcaccgaaccggtggtccgcacctggtccgcctacgcgttcgacctgatccgccgtgcc
cgggtcgaggggctgctgcccttcgtcgagcgcgccccgcggctgctctcgggccccgag
caggacaccctcatcggcaacctgctcgaaggccacgcccagggcctgaccccgggccca
ggctggcctgccgacctggagctggcggtggaaacccggggcttccgcaaggagctgcgc
gaattcttcgaccgcgtctcggaactgggcctggacccggcggacatcgccgactacggg
caggccgccgcccgcccggaatggcttgccgccgcccggttctaccaggagtaccgcgac
ctgctggatttgggcaacgccgaagccttcgacccggcggggctgatcacccgcgccgcg
cagctgctggaggagaaccccgacttcctgcacgccgagcaggaccggctggcgctgatc
ctggttgacgacctgcaggaagccaccctgtcccagcaccggctgctggcgctgctgggc
cgcgaccgcccgctgctggccttcgctgcgccggacagcgtggtccagggattccgcggc
gcccgcgccgaccagctgcaccgcttctccgcccgctacaccagcgccgatgacgcgcag
atcctcgaactgggcaccggctaccggatgggccctgaaatcaccgaggcctggcgccgc
atcgtgcgccgcatcccggtggccaccggaacccgtggccgcgccgtggagccggtggcg
gccgccggcgccggggccgcgcaggcgctcaccttcgagaactccaccctggaagagcgc
ttcatcgcccagcgcatcgtgcagctgaacctcttcgaaggcaaggacctctcggacatc
gccatcgtggtgcgcaacggttcccaagtgcgttcgctcagccgcttcctggaaggccag
ggcatcgccgtgcaggtgcccccggccgaaatcccgctcaaggacgaatccgcggtccgc
ccgctgctggacctgctggacctggcgttcgccgacggggcgggcgaggatccgctgctg
atgcagaacctgctgctctcgcgctacggcatgagcaccgcgctggaaatccgccggctg
cgccagctgctgcgccagcaggagtcgtcccgcggcggtcggcgctccagccaggagctg
ctcgaagcctgcctcacggagccggagctcgccgcggacctgggcaagccggccttcggg
ctgcagcgtctgctgaagatgtacaccgcgctgcgcgaggagcttgcctccggcaccgct
accccggaaactgccctgtgggtcatgtgggaagcctccgggcgcgccaaggcctggcgg
gaggaagccctgggcgccggaaccaccgcacgccgggccgaccatgacctggatgcggtg
ctgtccctgttccaagccgccgagcgattcgtcgaccagctgcccggagcaagcgtggag
cagttcatcgagcacatcctgcaccaggagctgcccatggactcgctggccagccgcggc
tccggaggccagcacgtcacggtgctgaccaccgcggcagccgccggcaagcagtggccc
atcgtcttcatcccggggctgcaggaaggatcctggcccaacctgcggctgcgcggcgaa
ctgctgggctcgaacgcgctggccgacgtggtggagcacggcatcgggttcctggccacc
cggacccccacacacctggtccgccagatccgcagcgacgagctgcgcagcttcagcaac
gcggtctcccgcgccagctcccagctgatctgcaccgccgtggacaacgaggactcccag
ccttcctccttcatggacctggtggatccgccgggggatgagggccgcgccccgaccccg
gtgccgcgcatccgcgcgctacccgccctggtggcggagctgcgcaataccgcagaacgc
gccaaggccgcgcagctcggggcgatcgccccaccgccgcaggtcagcgccgacgacctg
taccgggatgcagcccaggtgctctccgggctggcggcgcagccgcgcaccgtccgcggg
gcgcacccctcctcctggtggggcatgctgccgttgagcagccatgggccggtcatcccg
gaaggccagccgcgcaggatctcgccctccaaggtcgagaccctggtcaagtcgccgctg
aactggtttgtgcaaagcgccggaggcaccgcggcccacgacttcgcagcctccctggga
accttgatccactccatcgcggaggaacaccccgaggccagcagctcggaatacgagcgg
atcctggaggagcgctggccggagctggagaagccggagaactgggaaggccagcgggac
ttcgaccgggccaactcgatgctcaagaagttcgcccagtattgcgtggcctcccgccag
gaaggccgccggctcgtggcccgcgagctgcccttcaacgtggaggtccccaccggcggg
gatccggtgcagatccgcggcatcatcgaccgcgtcgaggccgatgccaacggcagggtc
accgtggtggacctgaagaccggcgcctcggcgccgagcaaaaacgacgtgctggagcac
gcccagctgggcgtctaccagaccgccatccagctcggtgccctgcaggagcacgagcag
acggccggcctctcggacgaccccgccggggcgaccctggtctacgtgggcacctccgcc
aagagccccgcattgcgcgaccagccggcgctgggccaggaagactgggcccgcaaactc
atcctggaagccgccgagctgatgggccacaccgaattcaccacccggcatgtggctgga
tccgcaggcctgctgggcagctgcacccttcccgaaatctgtccgctgtgcaacgaagga
cgacaggtcaccgaaccatga
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